Utrecht University, Faculty of Veterinary Medicine, Department of Infectious Diseases and Immunology, Utrecht, the Netherlands
Utrecht University, Faculty of Veterinary Medicine, Department of Infectious Diseases and Immunology, Utrecht, the Netherlands.
Appl Environ Microbiol. 2020 Apr 1;86(8). doi: 10.1128/AEM.02590-19.
A nationwide study on the occurrence of extended-spectrum β-lactamase (ESBL)/AmpC in nonhospitalized horses in the Netherlands was performed. Molecular characterization was done, and questionnaires were analyzed to identify factors associated with carriage. In total, 796 horse owners were approached; 281 of these submitted a fecal sample from their horse(s), resulting in 362 samples. All samples were cultured qualitatively in Luria-Bertani (LB) broth and subsequently on MacConkey agar, both supplemented with 1 mg/liter cefotaxime (LB+ and MC+). Positive samples were subsequently cultured quantitatively on MC+. Initial extended-spectrum-β-lactamase (ESBL)/AmpC screening was performed by PCR, followed by whole-genome sequencing on selected strains. Associations between ESBL/AmpC carriage and questionnaire items were analyzed using a univariate generalized estimating equation (GEE) regression analysis, followed by a multiple GEE model for relevant factors. In total, 39 of 362 samples (11%) were determined to be positive for ESBL/AmpC. -carrying isolates were obtained from 77% of positive samples ( = 30). Other ESBL/AmpC genes observed included , , , , , , and A high association between the presence of and IncHI1 plasmids was observed (46% of samples; = 18). Based on core genome analysis ( = 48 isolates), six clusters were identified, three of which represented 80% of the isolates. A negative association between ESBL/AmpC carriage and horses being in contact with other horses at a different site was observed. The presence of a dog on the premises and housing in a more densely human-populated region were positively associated. Extended-spectrum β-lactamases (ESBLs) are widespread in human and animal populations and in the environment. Many different ESBL variants exist. The dissemination of ESBLs within and between populations and the environment is also largely influenced by genetic mobile elements (e.g., plasmids) that facilitate spread of these ESBLs. In order to identify potential attributable ESBL sources for, e.g., the human population, it is important to identify the different ESBL variants, the bacteria carrying them, and the potential risk factors for ESBL carriage from other potential sources. This nationwide study focuses on ESBL carriage in the open horse population and investigated the molecular characteristics, geographical distribution throughout the Netherlands, and potential risk factors for fecal ESBL carriage in horses. These data can be used for future attribution studies in order to reduce potential transmission of ESBL-producing bacteria between sources.
一项针对荷兰非住院马匹中产超广谱β-内酰胺酶(ESBL)/AmpC 的全国性研究已经完成。进行了分子特征分析,并分析了调查问卷,以确定与携带相关的因素。总共联系了 796 名马主;其中 281 名提交了他们的马的粪便样本,结果得到了 362 个样本。所有样本均在 LB 肉汤和随后的麦康凯琼脂中进行定性培养,均添加了 1 毫克/升头孢噻肟(LB+和 MC+)。阳性样本随后在 MC+上进行定量培养。最初通过 PCR 进行扩展谱-β-内酰胺酶(ESBL)/AmpC 筛选,然后对选定的菌株进行全基因组测序。使用单变量广义估计方程(GEE)回归分析和相关因素的多个 GEE 模型分析 ESBL/AmpC 携带与问卷项目之间的关联。总共 362 个样本中的 39 个(11%)被确定为 ESBL/AmpC 阳性。从阳性样本中获得了携带的分离株(77%,=30)。观察到的其他 ESBL/AmpC 基因包括 blaCTX-M-14、blaCTX-M-15、blaCTX-M-3、blaCTX-M-55、blaOXA-1、blaTEM-1B 和 blaSHV-12。还观察到存在 和 IncHI1 质粒之间的高度相关性(46%的样本;=18)。基于核心基因组分析(=48 株),鉴定出 6 个 簇,其中 3 个代表了 80%的分离株。观察到 ESBL/AmpC 携带与马在不同地点与其他马接触呈负相关。马房内有狗和居住在人口密集地区与携带呈正相关。扩展谱β-内酰胺酶(ESBLs)在人类、动物和环境中广泛存在。存在许多不同的 ESBL 变体。ESBLs 在人群和环境中的传播也在很大程度上受到遗传可移动元件(例如质粒)的影响,这些元件促进了这些 ESBLs 的传播。为了确定潜在的可归因于 ESBL 的来源,例如人类,重要的是要确定不同的 ESBL 变体、携带它们的细菌以及来自其他潜在来源的 ESBL 携带的潜在风险因素。这项全国性研究侧重于开放马群中的 ESBL 携带情况,并调查了 ESBL 在荷兰的分子特征、地理分布以及马粪中 ESBL 携带的潜在风险因素。这些数据可用于未来的归因研究,以减少来源之间产 ESBL 细菌的潜在传播。