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通过靶点垂钓研究鉴定一种选择性磷酸二酯酶4B(PDE4B)抑制剂并评估槲皮素3 - 阿拉伯吡喃糖基 -(1→2)- 鼠李吡喃糖苷

Identification of a Selective PDE4B Inhibitor From by Target Fishing Study and Evaluation of Quercetin 3--Arabinopyranosyl-(1→2)-Rhamnopyranoside.

作者信息

Lourenço Estela M G, Fernandes Júlia M, Carvalho Vinícius de F, Grougnet Raphael, Martins Marco A, Jordão Alessandro K, Zucolotto Silvana M, Barbosa Euzébio G

机构信息

Laboratório de Química Farmacêutica Computacional, Departamento de Farmácia, Universidade Federal do Rio Grande do Norte, Natal, Brazil.

Laboratório de Produtos Naturais Bioativos, Departamento de Farmácia, Universidade Federal do Rio Grande do Norte, Natal, Brazil.

出版信息

Front Pharmacol. 2020 Jan 22;10:1582. doi: 10.3389/fphar.2019.01582. eCollection 2019.

Abstract

Natural products are considered an important source of bioactive compounds especially in biodiversity-rich countries like Brazil. The identification of potential targets is crucial to the development of drugs from natural sources. In this context, methodologies, such as inverse virtual screening (target fishing), are interesting tools as they are a rational and direct method that reduces costs and experimental time. Among the species of Brazilian biomes, (Lam.) Oken, native to Madagascar, is widely used by the population to treat inflammation conditions. It has a remarkable presence of flavonoids, including quercetin 3--arabinopyranosyl-(1→2)-rhamnopyranoside (), considered one of its major compounds. However, until now there were no studies addressing its putative mechanism of action and explaining its pharmacological action. The enzyme PDE4B, known as an antiinflammatory protein, was indicated as a promising target by target fishing methods. This activity was confirmed by enzymatic inhibition, and an expressive selectivity of PDE4B over PDE4A was demonstrated. The interactions were investigated through molecular dynamics simulations. The results were pioneering, representing an advance in the investigation of the antiinflammatory action of and confirm the potential of the flavonoid as a chemical extract marker. Also, the flavonoid was shown to be a promising lead for the design of other selective PDE4B blockers to treat inflammatory diseases.

摘要

天然产物被认为是生物活性化合物的重要来源,尤其是在像巴西这样生物多样性丰富的国家。确定潜在靶点对于从天然来源开发药物至关重要。在这种背景下,诸如反向虚拟筛选(靶点垂钓)等方法是有趣的工具,因为它们是一种合理且直接的方法,可降低成本和实验时间。在巴西生物群落的物种中,原产于马达加斯加的(Lam.)奥肯被人们广泛用于治疗炎症。它含有大量黄酮类化合物,包括槲皮素3 - 阿拉伯吡喃糖基 -(1→2) - 鼠李吡喃糖苷(),被认为是其主要化合物之一。然而,到目前为止,尚无研究探讨其假定的作用机制并解释其药理作用。通过靶点垂钓方法表明,被称为抗炎蛋白的磷酸二酯酶4B(PDE4B)是一个有前景的靶点。通过酶抑制证实了这种活性,并证明了PDE4B对PDE4A具有显著的选择性。通过分子动力学模拟研究了相互作用。这些结果具有开创性,代表了在研究抗炎作用方面的进展,并证实了该黄酮类化合物作为化学提取物标志物的潜力。此外,该黄酮类化合物被证明是设计其他用于治疗炎症性疾病的选择性PDE4B阻滞剂的有前景的先导化合物。

https://cdn.ncbi.nlm.nih.gov/pmc/blobs/aeea/6987432/05cb190d6f49/fphar-10-01582-g001.jpg

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