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微小 RNA 调控网络作为自发性脑出血患者晚期发作的生物标志物。

MicroRNA Regulatory Network as Biomarkers of Late Seizure in Patients with Spontaneous Intracerebral Hemorrhage.

机构信息

Neurocritical Care and Neurology, University of Queensland, Ochsner Clinical School, Ochsner Medical Center, 1514 Jefferson Highway, New Orleans, LA, 70121, USA.

Institute of Translational Research, Ochsner Medical Center, 1514 Jefferson Highway, New Orleans, LA, 70121, USA.

出版信息

Mol Neurobiol. 2020 May;57(5):2346-2357. doi: 10.1007/s12035-020-01872-y. Epub 2020 Feb 10.

Abstract

Approximately 15% of patients experience seizures after spontaneous intracerebral hemorrhage (ICH). The pathogenesis of seizures post-ICH is not well-known; however, iron deposition-related neuronal injury following hemoglobin breakdown may contribute. Profiling known miRNAs to identify biomarkers for post-ICH late seizures, we found 64 differentially expressed miRNA: 32 upregulated and 32 downregulated in seizure vs. non-seizure. Functional classification of upregulated miRNA for KEGG pathways and biological processes identified enrichment for cell cycle, protein modifications, and FoxO neurotrophin signaling pathways. No significant enrichment was found for downregulated miRNA. Molecular functions Gene Ontology (GO) terms enriched for upregulated miRNA are numerous, while downregulated miRNAs were associated with ion channel activity. RT-PCR confirmed two miRNAs, 4317 and 4325, were differentially expressed in patients who developed seizures at 1 year. MiR-4317 regulates SLC38A1, a glutamine-glutamate transporter. Integrated miRNA-mRNA network analysis identified COMMD6, APOBEC2, and RASSF6-involved in NF-kB regulation. Two miRNAs (miR-4317 and 4325) differentiated post-ICH late seizures vs. non-seizures at 1 year. The results suggest functional and miRNA-mRNA networks as potential biomarkers for post-ICH late seizures.

摘要

约 15%的自发性脑出血(ICH)患者会出现癫痫发作。ICH 后癫痫发作的发病机制尚不清楚;然而,血红蛋白分解后的铁沉积相关神经元损伤可能与此有关。为了对已知 miRNA 进行分析,以确定 ICH 后迟发性癫痫的生物标志物,我们发现了 64 个差异表达的 miRNA:32 个上调,32 个下调。KEGG 途径和生物过程上调 miRNA 的功能分类确定了细胞周期、蛋白质修饰和 FoxO 神经营养因子信号通路的富集。下调 miRNA 没有发现显著富集。上调 miRNA 的分子功能基因本体论(GO)术语很多,而下调 miRNA 与离子通道活性有关。实时 PCR 证实,在 1 年内发生癫痫发作的患者中,有两种 miRNA(miR-4317 和 miR-4325)表达差异。miR-4317 调节 SLC38A1,一种谷氨酰胺-谷氨酸转运蛋白。整合的 miRNA-mRNA 网络分析确定了参与 NF-kB 调节的 COMMD6、APOBEC2 和 RASSF6。两种 miRNA(miR-4317 和 miR-4325)可在 1 年内区分 ICH 后迟发性癫痫发作与非癫痫发作。结果表明,功能和 miRNA-mRNA 网络可能是 ICH 后迟发性癫痫的潜在生物标志物。

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