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病毒沉淀法浓缩和检测环境水资源中的禽流感病毒及其在疫情调查中的可能应用。

A virus precipitation method for concentration & detection of avian influenza viruses from environmental water resources & its possible application in outbreak investigations.

机构信息

ICMR-National Institute of Virology-Mumbai Unit (Formerly Enterovirus Research Center), Mumbai, Maharashtra, India.

Avian Influenza Group, ICMR-National Institute of Virology-Microbial Containment Complex, Pune, Maharashtra, India.

出版信息

Indian J Med Res. 2019 Dec;150(6):612-619. doi: 10.4103/ijmr.IJMR_1697_18.

Abstract

BACKGROUND & OBJECTIVES: Avian influenza (AI) viruses have been a major cause of public health concern. Wild migratory birds and contaminated environmental sources such as waterbodies soiled with bird droppings play a significant role in the transmission of AI viruses. The objective of the present study was to develop a sensitive and user-friendly method for the concentration and detection of AI viruses from environmental water sources.

METHODS

Municipal potable water, surface water from reservoirs and sea were spiked with low pathogenic AI viruses. To concentrate the viruses by precipitation, a combination of potassium aluminium sulphate with milk powder was used. Real-time reverse transcription-polymerase chain reaction was performed for virus detection, and the results were compared with a virus concentration method using erythrocytes. Drinking water specimens from poultry markets were also tested for the presence of AI viruses.

RESULTS

A minimum of 10 EID(50% egg infectious dose)/ml spiked H5N1 and 10 EID/ml spiked H9N2 viruses were detected from spiked potable water; 10 and 10 EID/ml spiked H5N1 virus was detected from surface water and seawater samples, respectively. The present method was more sensitive than the erythrocyte-binding method as approximately 10-fold higher infectious virus titres were obtained. AI H9N2 viruses were detected and isolated from water from local poultry markets, using this method.

INTERPRETATION & CONCLUSIONS: Viability and recovery of the spiked viruses were not affected by precipitation. The present method may be suitable for the detection of AI viruses from different environmental water sources and can also be applied during outbreak investigations.

摘要

背景与目的

禽流感(AI)病毒一直是公共卫生关注的主要原因。野生候鸟和受鸟类粪便污染的水体等受污染的环境源在 AI 病毒的传播中起着重要作用。本研究的目的是开发一种从环境水源中浓缩和检测 AI 病毒的敏感且易于使用的方法。

方法

向市售饮用水、水库地表水和海水样本中添加低致病性 AI 病毒。为了通过沉淀浓缩病毒,使用硫酸铝钾和奶粉的组合。使用实时逆转录聚合酶链反应进行病毒检测,并将结果与使用红细胞的病毒浓缩方法进行比较。还检测了来自家禽市场的饮用水样本中是否存在 AI 病毒。

结果

从添加的饮用水样本中检测到 10 EID(50%鸡胚感染剂量)/ml 的 H5N1 和 10 EID/ml 的 H9N2 病毒;从地表水和海水样本中分别检测到 10 和 10 EID/ml 的 H5N1 病毒。与红细胞结合法相比,本方法更灵敏,可获得约 10 倍更高的感染性病毒滴度。使用该方法从当地家禽市场的水中检测到并分离出 AI H9N2 病毒。

解释与结论

沉淀不会影响添加病毒的存活和恢复。该方法可能适用于从不同环境水源中检测 AI 病毒,也可用于暴发调查。

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