Department of Biology, Duke University, Durham, NC 27708-0338, USA.
Graduate School of Pharmaceutical Sciences, Tohoku University, Sendai 980-8578, Japan.
Int J Mol Sci. 2020 Feb 9;21(3):1151. doi: 10.3390/ijms21031151.
The eukaryotic proteome has to be precisely regulated at multiple levels of gene expression, from transcription, translation, and degradation of RNA and protein to adjust to several cellular conditions. Particularly at the translational level, regulation is controlled by a variety of RNA binding proteins, translation and associated factors, numerous enzymes, and by post-translational modifications (PTM). Ubiquitination, a prominent PTM discovered as the signal for protein degradation, has newly emerged as a modulator of protein synthesis by controlling several processes in translation. Advances in proteomics and cryo-electron microscopy have identified ubiquitin modifications of several ribosomal proteins and provided numerous insights on how this modification affects ribosome structure and function. The variety of pathways and functions of translation controlled by ubiquitin are determined by the various enzymes involved in ubiquitin conjugation and removal, by the ubiquitin chain type used, by the target sites of ubiquitination, and by the physiologic signals triggering its accumulation. Current research is now elucidating multiple ubiquitin-mediated mechanisms of translational control, including ribosome biogenesis, ribosome degradation, ribosome-associated protein quality control (RQC), and redox control of translation by ubiquitin (RTU). This review discusses the central role of ubiquitin in modulating the dynamism of the cellular proteome and explores the molecular aspects responsible for the expanding puzzle of ubiquitin signals and functions in translation.
真核生物的蛋白质组必须在多个基因表达水平上进行精确调控,从转录、RNA 和蛋白质的翻译和降解到适应几种细胞条件。特别是在翻译水平上,调节受多种 RNA 结合蛋白、翻译和相关因子、许多酶以及翻译后修饰(PTM)的控制。泛素化是一种作为蛋白质降解信号的重要 PTM,它作为一种调节蛋白质合成的调节剂,通过控制翻译中的几个过程而崭露头角。蛋白质组学和冷冻电子显微镜技术的进步已经鉴定了几种核糖体蛋白的泛素修饰,并提供了许多关于这种修饰如何影响核糖体结构和功能的见解。泛素控制的翻译途径和功能的多样性取决于参与泛素缀合和去除的各种酶、使用的泛素链类型、泛素化的靶位以及触发其积累的生理信号。目前的研究正在阐明多种泛素介导的翻译控制机制,包括核糖体生物发生、核糖体降解、核糖体相关蛋白质量控制 (RQC) 以及泛素介导的翻译氧化还原控制 (RTU)。本文讨论了泛素在调节细胞蛋白质组动态中的核心作用,并探讨了泛素信号和功能在翻译中不断扩展的分子方面。