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驱动蛋白 kinesin-II 的拥挤动力学。

The crowding dynamics of the motor protein kinesin-II.

机构信息

Department of Physics and Astronomy and LaserLaB, Vrije Universiteit, Amsterdam, Netherlands.

Institute of Physics, University of Amsterdam, Amsterdam, Netherlands.

出版信息

PLoS One. 2020 Feb 13;15(2):e0228930. doi: 10.1371/journal.pone.0228930. eCollection 2020.

DOI:10.1371/journal.pone.0228930
PMID:32053680
原文链接:https://pmc.ncbi.nlm.nih.gov/articles/PMC7018031/
Abstract

Intraflagellar transport (IFT) in C. elegans chemosensory cilia is an example of functional coordination and cooperation of two motor proteins with distinct motility properties operating together in large groups to transport cargoes: a fast and processive homodimeric kinesin-2, OSM-3, and a slow and less processive heterotrimeric kinesin-2, kinesin-II. To study the mechanism of the collective dynamics of kinesin-II of C. elegans cilia in an in vitro system, we used Total Internal Reflection Fluorescence microscopy to image the motility of truncated, heterodimeric kinesin-II constructs at high motor densities. Using an analysis technique based on correlation of the fluorescence intensities, we extracted quantitative motor parameters, such as motor density, velocity and average run length, from the image. Our experiments and analyses show that kinesin-II motility parameters are far less affected by (self) crowding than OSM-3. Our observations are supported by numerical calculations based on the TASEP-LK model (Totally Asymmetric Simple Exclusion Process-Langmuir Kinetics). From a comparison of data and modelling of OSM-3 and kinesin-II, a general picture emerges of the collective dynamics of the kinesin motors driving IFT in C. elegans chemosensory cilia and the way the motors deal with crowding.

摘要

秀丽隐杆线虫化学感觉纤毛内的鞭毛运输 (IFT) 是两种具有不同运动特性的马达蛋白协同工作以运输货物的功能协调和合作的一个例子:一种快速且连续的同源二聚体驱动蛋白-2(OSM-3)和一种缓慢且不太连续的异源三聚体驱动蛋白-2(驱动蛋白-II)。为了在体外系统中研究秀丽隐杆线虫纤毛中驱动蛋白-II的集体动力学机制,我们使用全内反射荧光显微镜在高马达密度下对截短的异源二聚体驱动蛋白-II 结构进行成像。我们使用基于荧光强度相关性的分析技术,从图像中提取了定量的马达参数,例如马达密度、速度和平均运行长度。我们的实验和分析表明,驱动蛋白-II 的运动参数受(自)拥挤的影响远小于 OSM-3。我们的观察结果得到了基于 TASEP-LK 模型(完全不对称简单排斥过程-朗缪尔动力学)的数值计算的支持。通过对 OSM-3 和驱动蛋白-II 的数据分析和建模的比较,出现了一种用于驱动秀丽隐杆线虫化学感觉纤毛 IFT 的驱动蛋白集体动力学的一般图像,以及马达处理拥挤的方式。

https://cdn.ncbi.nlm.nih.gov/pmc/blobs/0875/7018031/12a81add59e3/pone.0228930.g004.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/0875/7018031/4acfc1ab698a/pone.0228930.g001.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/0875/7018031/33ea8abdf77a/pone.0228930.g002.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/0875/7018031/ce357aa56711/pone.0228930.g003.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/0875/7018031/12a81add59e3/pone.0228930.g004.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/0875/7018031/4acfc1ab698a/pone.0228930.g001.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/0875/7018031/33ea8abdf77a/pone.0228930.g002.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/0875/7018031/ce357aa56711/pone.0228930.g003.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/0875/7018031/12a81add59e3/pone.0228930.g004.jpg

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Kinesin-2 motors adapt their stepping behavior for processive transport on axonemes and microtubules.驱动蛋白-2 马达通过调节其在轴丝和微管上的行进行为以实现连续运输。
EMBO Rep. 2017 Nov;18(11):1947-1956. doi: 10.15252/embr.201744097. Epub 2017 Sep 8.
3
Intraflagellar transport velocity is governed by the number of active KIF17 and KIF3AB motors and their motility properties under load.
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Proc Natl Acad Sci U S A. 2017 Aug 15;114(33):E6830-E6838. doi: 10.1073/pnas.1708157114. Epub 2017 Jul 31.
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KymographClear and KymographDirect: two tools for the automated quantitative analysis of molecular and cellular dynamics using kymographs.波形图分析软件Clear和波形图分析软件Direct:用于使用波形图对分子和细胞动力学进行自动定量分析的两种工具。
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