Zyubko Tatyana, Serebryakova Marina, Andreeva Julia, Metelev Mikhail, Lippens Guy, Dubiley Svetlana, Severinov Konstantin
Center for Life Sciences , Skolkovo Institute of Science and Technology , 3 Nobel str. , 143025 Moscow , Russia . Email:
Peter the Great St. Petersburg Polytechnic University , St. Petersburg , 195251 , Russia.
Chem Sci. 2019 Aug 30;10(42):9699-9707. doi: 10.1039/c9sc02370d. eCollection 2019 Nov 14.
Bacterial lasso peptides are made from linear ribosomally synthesized precursors by specific cleavage at the leader-core junction site of the precursor by a dedicated protease recognizing the leader, followed by cyclisation of the newly formed N-terminus of the core part with a side chain of the internal aspartic or glutamic residue catalyzed by a macrolactam synthetase. The resulting structure has a tail that is threaded and fixed inside the cycle formed. Here, we characterize a new lasso peptide, pseudomycoidin, encoded by DSM 12442. The most surprising and unique feature of pseudomycoidin is that it can be produced from the ribosomally synthesized core part by a macrolactam synthetase, in the absence of the leader protease. The minimalism of the pseudomycoidin synthesis system makes it a powerful model to generate pseudomycoidin-based lasso-peptide libraries and to study the poorly understood process of lasso formation. We detected two additional pseudomycoidin modifications: phosphorylation of a terminal residue that was previously observed in another lasso peptide, followed by glycosylation, which was not observed heretofore. We speculate that these bulky C-terminal modifications may help maintain the threaded lasso topology of the compound synthesized by the macrolactam synthetase.
细菌套索肽由核糖体合成的线性前体产生,在一种识别前导肽的专用蛋白酶作用下,前体在其前导肽-核心肽连接位点进行特异性切割,随后核心部分新形成的N端与内部天冬氨酸或谷氨酸残基的侧链通过大环内酰胺合成酶催化发生环化反应。所形成的结构有一条尾巴,该尾巴穿过并固定在形成的环内部。在此,我们对由DSM 12442编码的一种新的套索肽——假霉菌素进行了表征。假霉菌素最令人惊讶和独特的特征是,在没有前导蛋白酶的情况下,它可以由核糖体合成的核心部分通过大环内酰胺合成酶产生。假霉菌素合成系统的简约性使其成为生成基于假霉菌素的套索肽文库以及研究人们了解较少的套索形成过程的有力模型。我们检测到假霉菌素的另外两种修饰:一种末端残基的磷酸化,这种修饰先前在另一种套索肽中观察到,随后是糖基化,这在此前尚未观察到。我们推测,这些庞大的C端修饰可能有助于维持由大环内酰胺合成酶合成的化合物的套索拓扑结构。