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lasso 肽的发现、生物合成和功能的研究进展。

Advances in lasso peptide discovery, biosynthesis, and function.

机构信息

Department of Chemistry at the University of Illinois Urbana-Champaign, Urbana, IL, USA; Carl R. Woese Institute for Genomic Biology at University of Illinois Urbana-Champaign, Urbana, IL, USA.

Department of Chemistry at the University of Illinois Urbana-Champaign, Urbana, IL, USA; Carl R. Woese Institute for Genomic Biology at University of Illinois Urbana-Champaign, Urbana, IL, USA.

出版信息

Trends Genet. 2024 Nov;40(11):950-968. doi: 10.1016/j.tig.2024.08.002. Epub 2024 Aug 31.

DOI:10.1016/j.tig.2024.08.002
PMID:39218755
原文链接:https://pmc.ncbi.nlm.nih.gov/articles/PMC11537843/
Abstract

Lasso peptides are a large and sequence-diverse class of ribosomally synthesized and post-translationally modified peptide (RiPP) natural products characterized by their slip knot-like shape. These unique, highly stable peptides are produced by bacteria for various purposes. Their stability and sequence diversity make them a potentially useful scaffold for biomedically relevant folded peptides. However, many questions remain about lasso peptide biosynthesis, ecological function, and diversification potential for biomedical and agricultural applications. This review discusses new insights and open questions about lasso peptide biosynthesis and biological function. The role that genome mining has played in the development of new methodologies for discovering and diversifying lasso peptides is also discussed.

摘要

套索肽是一类由核糖体合成并经翻译后修饰的大型、序列多样的肽(RiPP)天然产物,其特征为滑结样形状。这些独特的、高度稳定的肽由细菌产生,用于各种目的。它们的稳定性和序列多样性使它们成为生物医学相关折叠肽的潜在有用支架。然而,关于套索肽生物合成、生态功能以及在生物医学和农业应用中的多样化潜力,仍有许多问题尚待解决。本综述讨论了套索肽生物合成和生物学功能方面的新见解和未解决的问题。还讨论了基因组挖掘在发现和多样化套索肽的新方法发展中所起的作用。

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Advances in lasso peptide discovery, biosynthesis, and function.lasso 肽的发现、生物合成和功能的研究进展。
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本文引用的文献

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Exploring the roles of ribosomal peptides in prokaryote-phage interactions through deep learning-enabled metagenome mining.通过深度学习赋能的宏基因组挖掘探索核糖体肽在原核生物-噬菌体相互作用中的作用。
Microbiome. 2024 May 24;12(1):94. doi: 10.1186/s40168-024-01807-y.
2
Merging Flow Synthesis and Enzymatic Maturation to Expand the Chemical Space of Lasso Peptides.融合流合成与酶促成熟技术以拓展拉索肽的化学空间。
J Am Chem Soc. 2024 Jun 26;146(25):17261-17269. doi: 10.1021/jacs.4c03898. Epub 2024 May 17.
3
Utilization of lasso peptides for biodegradation of polycyclic aromatic hydrocarbons.
mSystems. 2025 Jul 22;10(7):e0033325. doi: 10.1128/msystems.00333-25. Epub 2025 Jun 30.
4
Lasso peptides: A focus on therapeutic index.套索肽:关注治疗指数。
World J Microbiol Biotechnol. 2025 Apr 28;41(5):151. doi: 10.1007/s11274-025-04374-y.
5
A broad-spectrum lasso peptide antibiotic targeting the bacterial ribosome.一种靶向细菌核糖体的广谱套索肽抗生素。
Nature. 2025 Apr;640(8060):1022-1030. doi: 10.1038/s41586-025-08723-7. Epub 2025 Mar 26.
6
Evolution-Guided Discovery of Antimycobacterial Triculamin-Like Lasso Peptides.基于进化引导发现抗分枝杆菌的类三氯拉明套索肽
Angew Chem Int Ed Engl. 2025 May 12;64(20):e202425134. doi: 10.1002/anie.202425134. Epub 2025 Mar 5.
7
Phenotypic and Complete Reference Whole Genome Sequence Analyses of Two spp. Isolates from a Gray Wolf () Gastrointestinal Tract.来自一只灰狼(Canis lupus)胃肠道的两个种分离株的表型和全基因组序列完整参考分析。
Vet Sci. 2025 Jan 13;12(1):51. doi: 10.3390/vetsci12010051.
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A Broad Spectrum Lasso Peptide Antibiotic Targeting the Bacterial Ribosome.一种靶向细菌核糖体的广谱套索肽抗生素。
Res Sq. 2024 Sep 16:rs.3.rs-5058118. doi: 10.21203/rs.3.rs-5058118/v1.
利用套索肽降解多环芳烃。
Environ Microbiol Rep. 2024 Apr;16(2):e13197. doi: 10.1111/1758-2229.13197.
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Antimicrobial Lasso Peptide Cloacaenodin Utilizes a Unique TonB-Dependent Transporter to Access Susceptible Bacteria.抗菌套索肽 Cloacaenodin 利用独特的 TonB 依赖性转运蛋白进入易感细菌。
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Tryptophan-Centric Bioinformatics Identifies New Lasso Peptide Modifications.色氨酸中心的生物信息学鉴定新型套索肽修饰。
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The pearl jubilee of microcin J25: thirty years of research on an exceptional lasso peptide.微菌素 J25 的珍珠禧年:三十年对一种特殊套索肽的研究。
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