Laboratory of Food Chemistry, Wageningen University and Research, Bornse Weilanden 9, 6708 WG Wageningen, the Netherlands.
Carbohydr Polym. 2020 Apr 15;234:115917. doi: 10.1016/j.carbpol.2020.115917. Epub 2020 Jan 26.
Lytic polysaccharide monooxygenases (LPMOs) are powerful enzymes that degrade recalcitrant polysaccharides, such as cellulose. However, the identification of LPMO-generated C1- and/or C4-oxidised oligosaccharides is far from straightforward. In particular, their fragmentation patterns have not been well established when using mass spectrometry. Hence, we studied the fragmentation behaviours of non-, C1- and C4-oxidised cello-oligosaccharides, including their sodium borodeuteride-reduced forms, by using hydrophilic interaction chromatography and negative ion mode collision induced dissociation - mass spectrometry. Non-oxidised cello-oligosaccharides showed predominantly C- and A-type cleavages. In comparison, C4-oxidised ones underwent B-/Y- and X-cleavage close to the oxidised non-reducing end, while closer to the reducing end C-/Z- and A-fragmentation predominated. C1-oxidised cello-oligosaccharides showed extensively A-cleavage. Reduced oligosaccharides showed predominant glycosidic bond cleavage, both B-/Y- and C-/Z-, close to the non-reducing end. Our findings provide signature mass spectrometric fragmentation patterns to unambiguously elucidate the catalytic behaviour and classification of LPMOs.
溶细胞单加氧酶(LPMOs)是一种强大的酶,可以降解纤维素等难处理的多糖。然而,LPMO 生成的 C1-和/或 C4-氧化寡糖的鉴定远非易事。特别是,当使用质谱法时,它们的碎片模式尚未得到很好的建立。因此,我们通过亲水相互作用色谱和负离子模式碰撞诱导解离-质谱法研究了非、C1-和 C4-氧化的纤维二糖寡糖的碎片行为,包括它们的硼氢化钠还原形式。非氧化的纤维二糖寡糖主要表现出 C-和 A-型裂解。相比之下,C4-氧化的纤维二糖寡糖在靠近氧化的非还原端发生 B-/Y-和 X-裂解,而靠近还原端则主要发生 C-/Z-和 A-断裂。C1-氧化的纤维二糖寡糖表现出广泛的 A-裂解。还原寡糖在靠近非还原端的位置表现出主要的糖苷键裂解,包括 B-/Y-和 C-/Z-。我们的发现提供了特征性的质谱碎片模式,可以明确阐明 LPMO 的催化行为和分类。