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表皮生长因子受体4 3'-非翻译区变体(c.*3622A>G)与雌激素受体/孕激素受体阴性及晚期乳腺癌相关。

ErbB4 3'-UTR Variant (c.*3622A>G) is Associated with ER/PR Negativity and Advanced Breast Cancer.

作者信息

Tabatabian Maryam, Mesrian Tanha Hamzeh, Tabatabaeian Hossein, Sadeghi Samira, Ghaedi Kamran, Mohamadynejad Parisa

机构信息

Department of Biology, Faculty of Basic Science, Shahrekord Branch, Islamic Azad University, Shahrekord, Iran.

2Cellular and Molecular Biology Division, Department of Biology, Faculty of Sciences, University of Isfahan, Isfahan, 81746-73441 Iran.

出版信息

Indian J Clin Biochem. 2020 Jan;35(1):115-120. doi: 10.1007/s12291-018-0793-3. Epub 2018 Sep 28.

Abstract

A genetic variant may alter a gene expression level and as a result be associated with pathological characteristics in breast cancer. In this research, the frequency and association of the ErbB4 3'-untranslated region (3'-UTR) variant, rs12471583 (c.*3622A>G) was studied in an Iranian breast cancer patients. assessment was performed to predict the function of the rs12471583 variant located on the 3'-UTR of ErbB4. Furthermore, as a case-control study, this polymorphism was genotyped in 243 breast cancer patients and non-cancerous controls using the polymerase chain reaction-restriction fragment length polymorphism (PCR-RFLP) technique. The Armitage's trend test and regular association tests were performed to analyze a possible association between the rs12471583 and risk of breast cancer and its relevant pathological traits. The bioinformatics analysis predicted that the rs12471583 SNP is located on the four miRNA binding sites, including miR-511-5p, miR-4659a-5p, miR-4659b-5p, and miR-6830-3p. According to logistic regression tests, the G allele is negatively associated with ER- (OR = 0.20, 95% C.I. = 0.04-0.93,  = 0.026), PR- (OR = 0.31, 95% C.I. = 0.10-0.98,  = 0.039), ER-/PR- (OR = 0.20, 95% C.I. = 0.04-0.93,  = 0.026), and advanced breast cancer (OR = 0.40, 95% C.I. = 0.18-0.85,  = 0.016). It has been found that ErbB4 expression may be linked to unfavorable outcomes in breast cancer. Likewise, our results suggest that the G allele may strengthen miRNA-ErbB4 binding efficiency and as a result reduce expression of ErbB4. This is a possible explanation for the observed association.

摘要

一种基因变异可能会改变基因表达水平,进而与乳腺癌的病理特征相关联。在本研究中,我们对伊朗乳腺癌患者中ErbB4 3'-非翻译区(3'-UTR)变异rs12471583(c.*3622A>G)的频率及关联性进行了研究。我们进行了评估以预测位于ErbB4 3'-UTR上的rs12471583变异的功能。此外,作为一项病例对照研究,我们使用聚合酶链反应-限制性片段长度多态性(PCR-RFLP)技术对243例乳腺癌患者和非癌对照进行了该多态性的基因分型。采用阿米蒂奇趋势检验和常规关联性检验来分析rs12471583与乳腺癌风险及其相关病理特征之间的可能关联。生物信息学分析预测rs12471583单核苷酸多态性位于四个微小RNA(miRNA)结合位点上,包括miR-511-5p、miR-4659a-5p、miR-4659b-5p和miR-6830-3p。根据逻辑回归检验,G等位基因与雌激素受体阴性(ER-)(比值比[OR]=0.20,95%置信区间[C.I.]=0.04 - 0.93,P=0.026)、孕激素受体阴性(PR-)(OR=0.31,95% C.I.=0.10 - 0.98,P=0.039)、ER-/PR-(OR=0.20,95% C.I.=0.04 - 0.93,P=0.026)以及晚期乳腺癌(OR=0.40,95% C.I.=0.18 - 0.85,P=0.016)呈负相关。已发现ErbB4表达可能与乳腺癌的不良预后相关。同样,我们的结果表明G等位基因可能会增强miRNA-ErbB4的结合效率,从而降低ErbB4的表达。这是对观察到的关联性的一种可能解释。

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