Laboratory of Structural Bioinformatics and Computational Biology, Center for Biotechnology, Federal University of Rio Grande do Sul, Brazil.
Laboratory of Structural Bioinformatics and Computational Biology, Institute of Informatics, Federal University of Rio Grande do Sul, Brazil; Laboratory of Structural Bioinformatics and Computational Biology, Center for Biotechnology, Federal University of Rio Grande do Sul, Brazil.
Chemosphere. 2020 Jul;250:126202. doi: 10.1016/j.chemosphere.2020.126202. Epub 2020 Feb 18.
As the primary source of a wide range of industrial products, the study of petroleum-derived compounds is of pivotal importance. However, the process of oil extraction and refinement is among the most environmentally hazardous practices, impacting almost all levels of the ecological chain. So far, the most appropriate strategy to overcome such an issue is through bioremediation, which revolves around the employment of different microorganisms to degrade hazardous compounds, generating less environmental impact and lower monetary costs. In this sense, a myriad of organisms and enzymes are considered possible candidates for the bioremediation process. Amidst the potential candidates is α-amylase, an evolutionary conserved starch-degrading enzyme. Notably, α-amylase was not only seen to degrade n-alkanes, a subclass of alkanes considered the most abundant petroleum-derived compounds but also low-density polyethylene, a dangerous pollutant produced from petroleum. Thus, due to its high conservation in both eukaryotic and prokaryotic lineages, in addition to the capability to degrade different types of hazardous compounds, the study of α-amylase becomes a rising interest. Nevertheless, there are no studies that review all biotechnological applications of α-amylase for bioremediation. In this work, we critically review the potential biotechnological applications of α-amylase, focusing on the biodegradation of petroleum-derived compounds. Evolutionary aspects are discussed, as well for all structural information and all features that could impact on the employment of this protein in the biotechnological industry, such as pH, temperature, and medium conditions. New perspectives and critical assessments are conducted regarding the application of α-amylase in the bioremediation of n-alkanes.
作为广泛工业产品的主要来源,石油衍生化合物的研究至关重要。然而,石油开采和精炼过程是对环境危害最大的实践之一,几乎影响到生态链的各个层面。到目前为止,解决这个问题最恰当的策略是通过生物修复,这涉及到利用不同的微生物来降解危险化合物,从而产生较小的环境影响和较低的经济成本。在这方面,许多生物和酶被认为是生物修复过程的潜在候选者。在潜在的候选者中,α-淀粉酶是一种进化上保守的淀粉降解酶。值得注意的是,α-淀粉酶不仅可以降解正烷烃,这是烷烃的一个子类,被认为是最丰富的石油衍生化合物,还可以降解低密度聚乙烯,这是一种来自石油的危险污染物。因此,由于它在真核生物和原核生物中都具有高度的保守性,并且能够降解不同类型的危险化合物,对α-淀粉酶的研究成为一个新兴的关注点。然而,目前还没有研究综述α-淀粉酶在生物修复方面的所有生物技术应用。在这项工作中,我们批判性地综述了α-淀粉酶的潜在生物技术应用,重点是石油衍生化合物的生物降解。讨论了进化方面,以及所有结构信息和所有可能影响该蛋白在生物技术工业中应用的特征,如 pH 值、温度和介质条件。针对α-淀粉酶在正烷烃生物修复中的应用,我们进行了新的视角和批判性评估。