Wu Xueling, Gu Yichao, Wu Xiaoyan, Zhou Xiangyu, Zhou Han, Amanze Charles, Shen Li, Zeng Weimin
School of Minerals Processing and Bioengineering, Central South University, Changsha 410083, China.
Key Laboratory of Biometallurgy of Ministry of Education, Central South University, Changsha 410083, China.
Microorganisms. 2020 Feb 20;8(2):292. doi: 10.3390/microorganisms8020292.
As an environmental pollutant, tetracycline (TC) can persist in the soil for years and damage the ecosystem. So far, many methods have been developed to handle the TC contamination. Microbial remediation, which involves the use of microbes to biodegrade the pollutant, is considered cost-efficient and more suitable for practical application in soil. This study isolated several strains from TC-contaminated soil and constructed a TC-degrading bacterial consortium containing sp. XY-1 and sp. XY-2, which exhibited better growth and improved TC degradation efficiency compared with single strain (81.72% TC was biodegraded within 12 days in Lysogeny broth (LB) medium). Subsequently, lab-scale soil remediation was conducted to evaluate its effectiveness in different soils and the environmental effects it brought. Results indicated that the most efficient TC degradation was recorded at 30 °C and in soil sample Y which had relatively low initial TC concentration (around 35 mg/kg): TC concentration decreased by 43.72% within 65 days. Soil properties were affected, for instance, at 30 °C, the pH value of soil sample Y increased to near neutral, and soil moisture content (SMC) of both soils declined. Analysis of bacterial communities at the phylum level showed that , , , and were the four dominant phyla, and the relative abundance of significantly increased in both soils after bioremediation. Further analysis of bacterial communities at the genus level revealed that sp. XY-1 successfully proliferated in soil, while sp. XY-2 was undetectable. Moreover, bacteria associated with nitrogen cycling, biodegradation of organic pollutants, soil biochemical reactions, and plant growth were affected, causing the decline in soil bacterial diversity. Variations in the relative abundance of tetracycline resistance genes (TRGs) and mobile gene elements (MGEs) were investigated, the results obtained indicated that , , , , and had higher relative abundance in original soils, and the relative abundance of most TRGs and MGEs declined after the microbial remediation. Network analysis indicated that may dominate the transfer of TRGs, and , , , , , and were possible hosts of TRGs or MGEs. This study comprehensively evaluated the effectiveness and the ecological effects of the TC-degrading bacterial consortium in soil environment.
作为一种环境污染物,四环素(TC)可在土壤中持续存在数年并破坏生态系统。到目前为止,已经开发了许多方法来处理TC污染。微生物修复涉及利用微生物对污染物进行生物降解,被认为具有成本效益且更适合在土壤中实际应用。本研究从受TC污染的土壤中分离出几株菌株,并构建了一个含有XY-1菌和XY-2菌的TC降解细菌群落,与单一菌株相比,该群落表现出更好的生长性能和更高的TC降解效率(在溶菌肉汤(LB)培养基中,12天内81.72%的TC被生物降解)。随后,进行了实验室规模的土壤修复,以评估其在不同土壤中的有效性及其带来的环境影响。结果表明,在30℃且初始TC浓度相对较低(约35mg/kg)的土壤样品Y中,TC降解效率最高:65天内TC浓度下降了43.72%。土壤性质受到了影响,例如,在30℃时,土壤样品Y的pH值升高至接近中性,两种土壤的土壤水分含量(SMC)均下降。在门水平上对细菌群落的分析表明,变形菌门、放线菌门、酸杆菌门和芽单胞菌门是四个优势门,生物修复后两种土壤中变形菌门的相对丰度均显著增加。在属水平上对细菌群落的进一步分析表明,XY-1菌在土壤中成功增殖,而XY-2菌未被检测到。此外,与氮循环、有机污染物生物降解、土壤生化反应和植物生长相关的细菌受到影响,导致土壤细菌多样性下降。研究了四环素抗性基因(TRGs)和移动基因元件(MGEs)相对丰度的变化,结果表明,tetM、tetO、tetW、tetX和intI1在原始土壤中的相对丰度较高,微生物修复后大多数TRGs和MGEs的相对丰度下降。网络分析表明,intI1可能主导TRGs的转移,tetM、tetO、tetW、tetX、ermB和qacEΔ1可能是TRGs或MGEs的宿主。本研究全面评估了TC降解细菌群落在土壤环境中的有效性和生态效应。