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探索来自sp. CSL1的5-磷酸核糖异构酶B的多功能残基以增强D-阿洛糖的异构化作用

Exploring Multifunctional Residues of Ribose-5-phosphate Isomerase B from sp. CSL1 Enhancing Isomerization of d-Allose.

作者信息

Zhang Xiaofeng, Xu Xinqi, Yao Xuemei, Wang Rong, Tang Hengtao, Ju Xin, Li Liangzhi

机构信息

School of Chemistry, Biology, and Material Engineering, Suzhou University of Science and Technology, Suzhou 215009, P.R. China.

Fujian Key Laboratory of Marine Enzyme Engineering, Fuzhou University, Fujian 350116, P.R. China.

出版信息

J Agric Food Chem. 2020 Mar 18;68(11):3539-3547. doi: 10.1021/acs.jafc.9b07855. Epub 2020 Mar 9.

Abstract

Ribose-5-phosphate isomerase B is of great importance for biocatalysis and biosynthesis, but the multifunctional residues in active sites hinder the research efforts. This study employed rational design strategies to locate the key residues of RpiB from sp. CSL1 (OsRpiB). A single-mutant S9T of a noncontact residue showed 80% activity improvement toward d-allose. A double-mutant S98H/S134H further increased the activity to 3.6-fold. The mutations were analyzed by kinetics and molecular dynamics analyses, indicating that S9T might enhance the substrate binding and catalysis by inducing a steric effect, and S98H/S134H could strengthen both ring opening and binding of d-allose. Though S98H/S134H showed low temperature stability, its potential was explored by isomerizing d-allose to d-psicose with higher conversion and in less reaction time. The findings of this study were beneficial for illustrating the complex functions of key residues in RpiBs and applying OsRpiB in preparing rare sugars.

摘要

5-磷酸核糖异构酶B对生物催化和生物合成非常重要,但活性位点中的多功能残基阻碍了研究工作。本研究采用合理设计策略来定位来自sp. CSL1的RpiB(OsRpiB)的关键残基。非接触残基的单突变体S9T对d-阿洛糖的活性提高了80%。双突变体S98H/S134H进一步将活性提高到3.6倍。通过动力学和分子动力学分析对突变进行了分析,表明S9T可能通过诱导空间效应增强底物结合和催化作用,而S98H/S134H可以增强d-阿洛糖的开环和结合。尽管S98H/S134H表现出低温稳定性,但通过将d-阿洛糖异构化为d-塔格糖,以更高的转化率和更短的反应时间探索了其潜力。本研究结果有助于阐明RpiBs中关键残基的复杂功能,并将OsRpiB应用于制备稀有糖。

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