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将核糖-5-磷酸异构酶B从一种中心碳代谢酶改造为一种有前景的糖生物催化剂。

Engineering ribose-5-phosphate isomerase B from a central carbon metabolic enzyme to a promising sugar biocatalyst.

作者信息

Tang Hengtao, Ju Xin, Zhao Jing, Li Liangzhi

机构信息

School of Chemistry and Life Sciences, Suzhou University of Science and Technology, No.99 Xuefu Rd., Huqiu district, Suzhou, 215009, Jiangsu Province, People's Republic of China.

State Key Laboratory of Biocatalysis and Enzyme Engineering, Hubei Collaborative Innovation Center for Green Transformation of Bio-Resources, Hubei Key Laboratory of Industrial Biotechnology, School of Life Sciences, Hubei University, Wuhan, 430062, People's Republic of China.

出版信息

Appl Microbiol Biotechnol. 2021 Jan;105(2):509-523. doi: 10.1007/s00253-020-11075-z. Epub 2021 Jan 4.

Abstract

Ribose-5-phosphate isomerase B (RpiB) was first identified in the pentose phosphate pathway responsible for the inter-conversion of ribose-5-phosphate and ribulose-5-phosphate. Though there are seldom key enzymes in central carbon metabolic system developed as useful biocatalysts, RpiB with the advantages of wide substrate scope and high stereoselectivity has become a potential biotechnological tool to fulfill the demand of rare sugars currently. In this review, the pivotal roles of RpiB in carbon metabolism are summarized, and their sequence identity and structural similarity are discussed. Substrate binding and catalytic mechanisms are illustrated to provide solid foundations for enzyme engineering. Interesting differences in origin, physiological function, structure, and catalytic mechanism between RpiB and ribose-5-phosphate isomerase A are introduced. Moreover, enzyme engineering efforts for rare sugar production are stressed, and prospects of future development are concluded briefly in the viewpoint of biocatalysis. Aided by the progresses of structural and computational biology, the application of RpiB will be promoted greatly in the preparation of valuable molecules. KEY POINTS: • Detailed illustration of RpiB's vital function in central carbon metabolism. • Potential of RpiB in sequence, substrate scope, and mechanism for application. • Enzyme engineering efforts to promote RpiB in the preparation of rare sugars.

摘要

5-磷酸核糖异构酶B(RpiB)最初是在磷酸戊糖途径中被鉴定出来的,该途径负责5-磷酸核糖和5-磷酸核酮糖的相互转化。尽管在中心碳代谢系统中很少有关键酶被开发成为有用的生物催化剂,但RpiB具有底物范围广和立体选择性高的优点,已成为满足当前稀有糖需求的一种潜在生物技术工具。在这篇综述中,总结了RpiB在碳代谢中的关键作用,并讨论了它们的序列同一性和结构相似性。阐述了底物结合和催化机制,为酶工程提供了坚实的基础。介绍了RpiB与5-磷酸核糖异构酶A在起源、生理功能、结构和催化机制方面的有趣差异。此外,强调了用于生产稀有糖的酶工程努力,并从生物催化的角度简要总结了未来发展的前景。借助结构生物学和计算生物学的进展,RpiB在制备有价值分子方面的应用将得到极大促进。要点:• 详细阐述RpiB在中心碳代谢中的重要功能。• RpiB在序列、底物范围和应用机制方面的潜力。• 酶工程努力以促进RpiB在稀有糖制备中的应用。

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