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分析垂体转录组学表明,lncRNAs 参与了绵羊发情的调控。

Analysis of pituitary transcriptomics indicates that lncRNAs are involved in the regulation of sheep estrus.

机构信息

College of Life Sciences, Shihezi University, Shihezi, Xinjiang, China.

College of Animal Science and Technology, Shihezi University, Shihezi, Xinjiang, China.

出版信息

Funct Integr Genomics. 2020 Jul;20(4):563-573. doi: 10.1007/s10142-020-00735-y. Epub 2020 Feb 29.

DOI:10.1007/s10142-020-00735-y
PMID:32114660
Abstract

Seasonal estrus is a key factor limiting animal fertility, and understanding the molecular mechanisms that regulate animal estrus is important for improving animal fertility. The pituitary gland, which is the most important endocrine gland in mammals, plays an important role in regulating the physiological processes such as growth, development, and reproduction of animals. Here, we used RNA-seq technology to study the expression profile of lncRNAs in the anterior pituitary of sheep during estrus and anestrus. In this study, we identified a total of 995 lncRNAs, of which 335 lncRNAs were differentially expressed in two states (including 38 up-regulated and 297 down-regulated lncRNAs). RT-qPCR verified the expression levels of several lncRNAs. Target predictive analysis revealed that these lncRNAs can act in cis or trans and regulate the expression of genes involved in the regulation of sheep estrus. Target gene enrichment analysis of differentially expressed lncRNAs indicates that these lncRNAs can regulate sheep estrus by regulating hormone metabolism and energy metabolism. Through our research, we provide the expression profile of lncRNAs in the pituitary of sheep, which provides a valuable resource for further understanding of the genetic regulation of seasonal estrus in sheep from the perspective of lncRNAs.

摘要

季节性发情是限制动物繁殖力的关键因素,了解调节动物发情的分子机制对于提高动物繁殖力非常重要。垂体是哺乳动物最重要的内分泌腺,在调节动物的生长、发育和繁殖等生理过程中发挥着重要作用。在这里,我们使用 RNA-seq 技术研究了发情和非发情绵羊垂体中 lncRNAs 的表达谱。在这项研究中,我们总共鉴定了 995 个 lncRNAs,其中 335 个 lncRNAs在两种状态下差异表达(包括 38 个上调和 297 个下调的 lncRNAs)。RT-qPCR 验证了几个 lncRNAs 的表达水平。靶基因预测分析表明,这些 lncRNAs 可以顺式或反式作用,调节与绵羊发情调节相关的基因的表达。差异表达 lncRNAs 的靶基因富集分析表明,这些 lncRNAs 可以通过调节激素代谢和能量代谢来调节绵羊发情。通过我们的研究,我们提供了绵羊垂体中 lncRNAs 的表达谱,这为从 lncRNAs 角度进一步了解绵羊季节性发情的遗传调控提供了有价值的资源。

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