Institute of Materia Medica, Chinese Academy of Medical Sciences, Peking Union Medical College, Beijing, China.
The Sixth Clinical Hospital of Xinjiang Medical University, Ürümqi, China.
Front Cell Infect Microbiol. 2020 Feb 11;10:16. doi: 10.3389/fcimb.2020.00016. eCollection 2020.
Influenza A virus (IAV) is a threat to public health due to its high mutation rate and resistance to existing drugs. In this investigation, 15 targets selected from an influenza virus-host interaction network were successfully constructed as a multitarget virtual screening system for new drug discovery against IAV using Naïve Bayesian, recursive partitioning, and CDOCKER methods. The predictive accuracies of the models were evaluated using training sets and test sets. The system was then used to predict active constituents of Compound Yizhihao (CYZH), a Chinese medicinal compound used to treat influenza. Twenty-eight compounds with multitarget activities were selected for subsequent evaluation. Of the four compounds predicted to be active on neuraminidase (NA), chlorogenic acid, and orientin showed inhibitory activity . Linarin, sinensetin, cedar acid, isoliquiritigenin, sinigrin, luteolin, chlorogenic acid, orientin, epigoitrin, and rupestonic acid exhibited significant effects on TNF-α expression, which is almost consistent with predicted results. Results from a cytopathic effect (CPE) reduction assay revealed acacetin, indirubin, tryptanthrin, quercetin, luteolin, emodin, and apigenin had protective effects against wild-type strains of IAV. Quercetin, luteolin, and apigenin had good efficacy against resistant IAV strains in CPE reduction assays. Finally, with the aid of Gene Ontology biological process analysis, the potential mechanisms of CYZH action were revealed. In conclusion, a compound-protein interaction-prediction system was an efficient tool for the discovery of novel compounds against influenza, and the findings from CYZH provide important information for its usage and development.
甲型流感病毒(IAV)由于其高突变率和对现有药物的耐药性,对公共卫生构成威胁。在本研究中,我们从流感病毒-宿主相互作用网络中选择了 15 个靶标,成功构建了一个多靶标虚拟筛选系统,用于使用 Naive Bayesian、递归分区和 CDOCKER 方法发现针对 IAV 的新药。使用训练集和测试集评估了模型的预测准确性。然后,我们使用该系统预测中药复方一贯煎(CYZH)的活性成分,一贯煎用于治疗流感。选择了 28 种具有多靶标活性的化合物进行后续评估。在预测对神经氨酸酶(NA)有活性的四种化合物中,绿原酸和Orientin 显示出抑制活性。此外,香叶木素、橙皮苷、雪松酸、异甘草素、芥子苷、木犀草素、绿原酸、Orientin、epigoitrin 和rupestonic 酸对 TNF-α 表达有显著影响,这几乎与预测结果一致。细胞病变效应(CPE)减少测定结果表明,秦皮素、靛玉红、色胺酮、槲皮素、木犀草素、大黄素、芹菜素具有抗野生型 IAV 的保护作用。秦皮素、木犀草素和芹菜素在 CPE 减少测定中对耐药性 IAV 株具有良好的疗效。最后,借助基因本体论(GO)生物过程分析,揭示了 CYZH 作用的潜在机制。总之,化合物-蛋白质相互作用预测系统是发现新型抗流感化合物的有效工具,而 CYZH 的研究结果为其应用和开发提供了重要信息。