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血液多组学揭示了具有低糖尿病、血脂异常和高血压患病率人群聚类的见解。

Blood multiomics reveal insights into population clusters with low prevalence of diabetes, dyslipidemia and hypertension.

机构信息

Institute of Biomedical Sciences, Academia Sinica, Taipei, Taiwan.

Wego Private Bilingual Senior High School, Taipei, Taiwan.

出版信息

PLoS One. 2020 Mar 5;15(3):e0229922. doi: 10.1371/journal.pone.0229922. eCollection 2020.

DOI:10.1371/journal.pone.0229922
PMID:32134946
原文链接:https://pmc.ncbi.nlm.nih.gov/articles/PMC7058291/
Abstract

Diabetes, dyslipidemia and hypertension are important metabolic diseases that impose a great burden on many populations worldwide. However, certain population strata have reduced prevalence for all three diseases, but the underlying mechanisms are poorly understood. We sought to identify the phenotypic, genomic and metabolomic characteristics of the low-prevalence population to gain insights into possible innate non-susceptibility against metabolic diseases. We performed k-means cluster analysis of 16,792 subjects using anthropometric and clinical biochemistry data collected by the Taiwan Biobank. Nuclear magnetic resonance spectra-based metabolome analysis was carried out for 217 subjects with normal body mass index, good exercise habits and healthy lifestyles. We found that the gene APOA5 was significantly associated with reduced prevalence of disease, and lesser associations included the genes HIF1A, LIMA1, LPL, MLXIPL, and TRPC4. Blood plasma of subjects belonging to the low disease prevalence cluster exhibited lowered levels of the GlycA inflammation marker, very low-density lipoprotein and low-density lipoprotein cholesterol, triglycerides, valine and leucine compared to controls. Literature mining revealed that these genes and metabolites are biochemically linked, with the linkage between lipoprotein metabolism and inflammation being particularly prominent. The combination of phenomic, genomic and metabolomic analysis may also be applied towards the study of metabolic disease prevalence in other populations.

摘要

糖尿病、血脂异常和高血压是重要的代谢性疾病,给全球许多人群带来了巨大负担。然而,某些人群中这三种疾病的患病率较低,但潜在机制尚不清楚。我们试图确定低患病率人群的表型、基因组和代谢组学特征,以深入了解对代谢性疾病可能存在的先天不易感性。我们对台湾生物银行收集的 16792 名受试者的人体测量和临床生化数据进行了 k-均值聚类分析。对 217 名体重指数正常、运动习惯良好且生活方式健康的受试者进行了基于核磁共振谱的代谢组学分析。我们发现 APOA5 基因与疾病患病率降低显著相关,其他相关基因包括 HIF1A、LIMA1、LPL、MLXIPL 和 TRPC4。与对照组相比,属于低疾病患病率组的受试者的血浆中 GlycA 炎症标志物、极低密度脂蛋白和低密度脂蛋白胆固醇、甘油三酯、缬氨酸和亮氨酸水平降低。文献挖掘显示,这些基因和代谢物在生化上相互关联,脂蛋白代谢和炎症之间的联系尤为突出。表型、基因组和代谢组学分析的结合也可应用于其他人群代谢性疾病患病率的研究。

https://cdn.ncbi.nlm.nih.gov/pmc/blobs/78fb/7058291/092372fb6ab5/pone.0229922.g004.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/78fb/7058291/1a6c70f896ce/pone.0229922.g001.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/78fb/7058291/018c54f87d06/pone.0229922.g002.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/78fb/7058291/75b86b96fe56/pone.0229922.g003.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/78fb/7058291/092372fb6ab5/pone.0229922.g004.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/78fb/7058291/1a6c70f896ce/pone.0229922.g001.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/78fb/7058291/018c54f87d06/pone.0229922.g002.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/78fb/7058291/75b86b96fe56/pone.0229922.g003.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/78fb/7058291/092372fb6ab5/pone.0229922.g004.jpg

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