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好的振动:成熟酵母前 40S 核糖体颗粒的结构重塑,随后进行冷冻电镜观察。

Good Vibrations: Structural Remodeling of Maturing Yeast Pre-40S Ribosomal Particles Followed by Cryo-Electron Microscopy.

机构信息

Laboratoire de Biologie Moléculaire Eucaryote, Centre de Biologie Intégrative, Université de Toulouse, CNRS, UPS, 118 route de Narbonne, 31062 Toulouse CEDEX, France.

Institut de Pharmacologie et Biologie Structurale, Université de Toulouse, CNRS, UPS, 205 route de Narbonne, 31062 Toulouse CEDEX, France.

出版信息

Molecules. 2020 Mar 3;25(5):1125. doi: 10.3390/molecules25051125.

Abstract

Assembly of eukaryotic ribosomal subunits is a very complex and sequential process that starts in the nucleolus and finishes in the cytoplasm with the formation of functional ribosomes. Over the past few years, characterization of the many molecular events underlying eukaryotic ribosome biogenesis has been drastically improved by the "resolution revolution" of cryo-electron microscopy (cryo-EM). However, if very early maturation events have been well characterized for both yeast ribosomal subunits, little is known regarding the final maturation steps occurring to the small (40S) ribosomal subunit. To try to bridge this gap, we have used proteomics together with cryo-EM and single particle analysis to characterize yeast pre-40S particles containing the ribosome biogenesis factor Tsr1. Our analyses lead us to refine the timing of the early pre-40S particle maturation steps. Furthermore, we suggest that after an early and structurally stable stage, the beak and platform domains of pre-40S particles enter a "vibrating" or "wriggling" stage, that might be involved in the final maturation of 18S rRNA as well as the fitting of late ribosomal proteins into their mature position.

摘要

真核核糖体亚基的组装是一个非常复杂和有序的过程,从核仁开始,在细胞质中完成功能性核糖体的形成。在过去的几年中,通过低温电子显微镜(cryo-EM)的“分辨率革命”,真核核糖体生物发生的许多分子事件的特征得到了极大的改善。然而,如果酵母核糖体亚基的非常早期成熟事件得到了很好的描述,那么对于小(40S)核糖体亚基发生的最后成熟步骤知之甚少。为了尝试弥补这一空白,我们使用蛋白质组学结合 cryo-EM 和单颗粒分析来表征含有核糖体生物发生因子 Tsr1 的酵母 pre-40S 颗粒。我们的分析使我们能够细化早期 pre-40S 颗粒成熟步骤的时间安排。此外,我们提出,在早期和结构稳定的阶段之后,pre-40S 颗粒的喙和平台结构域进入“振动”或“扭动”阶段,这可能涉及 18S rRNA 的最终成熟以及晚期核糖体蛋白进入其成熟位置。

https://cdn.ncbi.nlm.nih.gov/pmc/blobs/44d3/7179242/3596e0e913c1/molecules-25-01125-g001.jpg

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