Kumar Satish, Paul Dhiraj, Shouche Yogesh, Suryavanshi Mangesh
National Centre for Cell Science, Savitribai Phule Pune University Campus, Pune, MH, India.
ICAR-National Institute of Abiotic Stress Management, Baramati, Pune, MH, India.
Data Brief. 2020 Feb 26;29:105336. doi: 10.1016/j.dib.2020.105336. eCollection 2020 Apr.
The bacterial isolates of genus are best known for their significant biodegradation abilities. Here, we report the data related to draft genome sequencing of strain SPC17 isolated from sediments of Lonar Lake. The assembly of 1598096 Illumina's paired-end sequencing reads resulted in 51 contigs for an overall genome assembly size of 4.98Mb. A total of 4546 genes were predicted using the National Center for Biotechnology Information- Prokaryotic Genome Annotation Pipeline (NCBI-PGAP). RAST server-based annotation of the strain SPC17 genome resulted in a total of 295 subsystems with 25% subsystem coverage. The data on the draft genome shotgun project are accessible at NCBI-GenBank under the accession number WUUR00000000. Our data resource will facilitate further molecular and genomic studies of diverse hydrocarbon catabolizing genes present in strain SPC17.
某属的细菌分离株以其显著的生物降解能力而最为人所知。在此，我们报告与从洛纳尔湖沉积物中分离出的某菌株SPC17的基因组草图测序相关的数据。对1598096条Illumina双端测序读段进行组装，得到51个重叠群，基因组组装总大小为4.98Mb。使用美国国立生物技术信息中心原核生物基因组注释管道（NCBI-PGAP）预测出总共4546个基因。基于RAST服务器对某菌株SPC17基因组进行注释，结果共有295个子系统，子系统覆盖率为25%。基因组鸟枪法草图项目的数据可在NCBI-GenBank上获取，登录号为WUUR00000000。我们的数据资源将有助于对某菌株SPC17中存在的多种碳氢化合物分解代谢基因进行进一步的分子和基因组研究。
