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一种共生肠道细菌的一对酯酶从复杂 β-甘露聚糖的所有位置去除乙酰化。

A pair of esterases from a commensal gut bacterium remove acetylations from all positions on complex β-mannans.

机构信息

Faculty of Chemistry, Biotechnology and Food Science, Norwegian University of Life Sciences, 1432 Ås, Norway.

The Norwegian Biopolymer Laboratory, Department of Biotechnology and Food Science, Norwegian University of Science and Technology, N-7491 Trondheim, Norway.

出版信息

Proc Natl Acad Sci U S A. 2020 Mar 31;117(13):7122-7130. doi: 10.1073/pnas.1915376117. Epub 2020 Mar 13.

Abstract

β-mannans and xylans are important components of the plant cell wall and they are acetylated to be protected from degradation by glycoside hydrolases. β-mannans are widely present in human and animal diets as fiber from leguminous plants and as thickeners and stabilizers in processed foods. There are many fully characterized acetylxylan esterases (AcXEs); however, the enzymes deacetylating mannans are less understood. Here we present two carbohydrate esterases, CE2 and CE17, from the Firmicute , which together deacetylate complex galactoglucomannan (GGM). The three-dimensional (3D) structure of CE17 with a mannopentaose in the active site shows that the CBM35 domain of CE17 forms a confined complex, where the axially oriented C2-hydroxyl of a mannose residue points toward the Ser41 of the catalytic triad. Cavities on the CE17 surface may accept galactosylations at the C6 positions of mannose adjacent to the mannose residue being deacetylated (subsite -1 and +1). In-depth characterization of the two enzymes using time-resolved NMR, high-performance liquid chromatography (HPLC), and mass spectrometry demonstrates that they work in a complementary manner. CE17 exclusively removes the axially oriented 2--acetylations on any mannose residue in an oligosaccharide, including double acetylated mannoses, while the CE2 is active on 3-, 4-, and 6-acetylations. Activity of CE2 is dependent on CE17 removing 2--acetylations from double acetylated mannose. Furthermore, transacetylation of oligosaccharides with the 2--specific CE17 provided insight into how temperature and pH affects acetyl migration on manno-oligosaccharides.

摘要

β-甘露聚糖和木聚糖是植物细胞壁的重要组成部分,它们被乙酰化以防止被糖苷水解酶降解。β-甘露聚糖广泛存在于人类和动物的饮食中,作为豆类植物的纤维,以及加工食品中的增稠剂和稳定剂。有许多完全表征的乙酰木聚糖酯酶(AcXEs);然而,脱乙酰甘露聚糖的酶则了解较少。在这里,我们展示了来自厚壁菌门的两种碳水化合物酯酶,CE2 和 CE17,它们共同脱乙酰化复杂的半乳糖葡甘露聚糖(GGM)。CE17 与活性位点中的甘露五糖的三维(3D)结构表明,CE17 的 CBM35 结构域形成一个受限的复合物,其中轴向定向的 C2-羟基的一个甘露糖残基指向催化三联体的 Ser41。CE17 表面上的腔可能接受与正在脱乙酰化的甘露糖相邻的 C6 位置的半乳糖基化(亚位点-1 和+1)。使用时间分辨 NMR、高效液相色谱(HPLC)和质谱对两种酶进行深入表征,证明它们以互补的方式工作。CE17 专门去除寡糖中任何甘露糖残基上轴向定向的 2--乙酰化,包括双乙酰化的甘露糖,而 CE2 对 3-、4-和 6-乙酰化具有活性。CE2 的活性依赖于 CE17 从双乙酰化的甘露糖上去除 2--乙酰化。此外,具有 2--特异性的 CE17 的寡糖的转乙酰化提供了有关温度和 pH 如何影响甘露寡糖上乙酰基迁移的见解。

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