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假基因 DMD 基因。

Pseudoexons of the DMD Gene.

机构信息

Centre for Molecular Medicine and Innovative Therapeutics, Murdoch University and Perron Institute, Perth, Australia.

出版信息

J Neuromuscul Dis. 2020;7(2):77-95. doi: 10.3233/JND-190431.

DOI:10.3233/JND-190431
PMID:32176650
原文链接:https://pmc.ncbi.nlm.nih.gov/articles/PMC7175933/
Abstract

The DMD gene is the largest in the human genome, with a total intron content exceeding 2.2Mb. In the decades since DMD was discovered there have been numerous reported cases of pseudoexons (PEs) arising in the mature DMD transcripts of some individuals, either as the result of mutations or as low-frequency errors of the spliceosome. In this review, I collate from the literature 58 examples of DMD PEs and examine the diversity and commonalities of their features. In particular, I note the high frequency of PEs that arise from deep intronic SNVs and discuss a possible link between PEs induced by distal mutations and the regulation of recursive splicing.

摘要

DMD 基因是人类基因组中最大的基因,其内含子总含量超过 2.2Mb。自 DMD 被发现以来的几十年中,已有许多报道称,一些个体的成熟 DMD 转录本中出现了假外显子(PEs),这些 PEs 是由于突变或剪接体的低频错误所致。在这篇综述中,我从文献中整理了 58 个 DMD PEs 的例子,并研究了它们特征的多样性和共性。特别是,我注意到源自深内含子 SNVs 的 PEs 的高频,并讨论了远端突变诱导的 PEs 与递归剪接调控之间可能存在的联系。

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The Role of MicroRNA in the Pathogenesis of Duchenne Muscular Dystrophy.微小 RNA 在杜氏肌营养不良症发病机制中的作用。
Int J Mol Sci. 2024 Jun 1;25(11):6108. doi: 10.3390/ijms25116108.
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The complex landscape of DMD mutations: moving towards personalized medicine.杜氏肌营养不良症(DMD)突变的复杂情况:迈向个性化医疗

本文引用的文献

1
Splicing mutations in human genetic disorders: examples, detection, and confirmation.人类遗传疾病中的剪接突变:实例、检测与确认
J Appl Genet. 2018 Aug;59(3):253-268. doi: 10.1007/s13353-018-0444-7. Epub 2018 Apr 21.
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Timing and localization of human dystrophin isoform expression provide insights into the cognitive phenotype of Duchenne muscular dystrophy.人类抗肌萎缩蛋白异构体表达的时间和定位为了解杜氏肌营养不良症的认知表型提供了线索。
Sci Rep. 2017 Oct 3;7(1):12575. doi: 10.1038/s41598-017-12981-5.
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Exonization of an Intronic LINE-1 Element Causing Becker Muscular Dystrophy as a Novel Mutational Mechanism in Dystrophin Gene.
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A novel deep intronic variant introduce pseudoexon in Becker muscular dystrophy: A case report.一种新型的深度内含子变异在贝克肌营养不良症中引入假外显子:一例报告。
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Uncovering the true features of dystrophin gene rearrangement and improving the molecular diagnosis of Duchenne and Becker muscular dystrophies.揭示肌营养不良蛋白基因重排的真实特征并改善杜氏和贝克型肌营养不良症的分子诊断。
iScience. 2023 Oct 30;26(12):108365. doi: 10.1016/j.isci.2023.108365. eCollection 2023 Dec 15.
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Case report: a novel deep intronic splice-altering variant in as a cause of Becker muscular dystrophy.病例报告:一种新的内含子深处剪接改变变异体作为贝克肌营养不良症的病因
Front Genet. 2023 Sep 19;14:1226766. doi: 10.3389/fgene.2023.1226766. eCollection 2023.
7
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内含子LINE-1元件外显子化导致贝氏肌营养不良症,作为肌营养不良蛋白基因中的一种新型突变机制。
Genes (Basel). 2017 Oct 3;8(10):253. doi: 10.3390/genes8100253.
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Nucleic Acids Res. 2017 Sep 19;45(16):9503-9513. doi: 10.1093/nar/gkx661.
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