Wang Fan, Lian Chunfeng, Wu Zhengwang, Wang Li, Lin Weili, Gilmore John H, Shen Dinggang, Li Gang
Department of Radiology and BRIC, University of North Carolina at Chapel Hill, Chapel Hill, NC, USA.
Department of Psychiatry, University of North Carolina at Chapel Hill, Chapel Hill, NC, USA.
Med Image Comput Comput Assist Interv. 2019 Oct;11765:841-849. doi: 10.1007/978-3-030-32245-8_93. Epub 2019 Oct 10.
The human brain develops dynamically and regionally heterogeneously during the first two postnatal years. Cortical developmental regionalization, i.e., the landscape of cortical heterogeneity in development, reflects the organization of underlying microstructures, which are closely related to the functional principles of the cortex. Therefore, prospecting early cortical developmental regionalization can provide neurobiologically meaningful units for precise region localization, which will advance our understanding on brain development in this critical period. However, due to the absence of dedicated computational tools and large-scale datasets, our knowledge on early cortical developmental regionalization still remains intact. To fill both the methodological and knowledge gaps, we propose to explore the cortical developmental regionalization using a novel method based on nonnegative matrix factorization (NMF), due to its ability in analyzing complex high-dimensional data by representing data using several bases in a data-driven way. Specifically, a novel multi-view NMF (MV-NMF) method is proposed, in which multiple distinct and complementary cortical properties (i.e., multiple views) are jointly considered to provide comprehensive observation of cortical regionalization process. To ensure the sparsity of the discovered regions, an orthogonal constraint defined in Stiefel manifold is imposed in our MV-NMF method. Meanwhile, a graph-induced constraint is also included to improve the compactness of the discovered regions. Capitalizing on an unprecedentedly large dataset with 1,560 longitudinal MRI scans from 887 infants, we delineate the first neurobiologically meaningful representation of early cortical regionalization, providing a valuable reference for brain development studies.
人类大脑在出生后的头两年中动态且区域异质性地发育。皮质发育区域化,即发育过程中皮质异质性的格局,反映了潜在微观结构的组织,这些微观结构与皮质的功能原理密切相关。因此,探寻早期皮质发育区域化可为精确的区域定位提供具有神经生物学意义的单元,这将增进我们对这一关键时期大脑发育的理解。然而,由于缺乏专门的计算工具和大规模数据集,我们对早期皮质发育区域化的认识仍然有限。为了填补方法和知识上的空白,我们建议使用一种基于非负矩阵分解(NMF)的新方法来探索皮质发育区域化,因为它能够通过以数据驱动的方式用几个基来表示数据,从而分析复杂的高维数据。具体而言,我们提出了一种新颖的多视图NMF(MV-NMF)方法,其中联合考虑了多个不同且互补的皮质属性(即多个视图),以全面观察皮质区域化过程。为了确保所发现区域的稀疏性,我们在MV-NMF方法中施加了在Stiefel流形中定义的正交约束。同时,还包括一个图诱导约束以提高所发现区域的紧凑性。利用来自887名婴儿的1560次纵向MRI扫描的前所未有的大规模数据集,我们描绘了早期皮质区域化的首个具有神经生物学意义的表征,为大脑发育研究提供了有价值的参考。