Department of Biology, Augustana University, Sioux Falls, SD.
Department of Ecology and Evolution, University of Chicago, Chicago, IL.
Mol Biol Evol. 2020 Aug 1;37(8):2257-2267. doi: 10.1093/molbev/msaa080.
Metabolic networks are complex cellular systems dependent on the interactions among, and regulation of, the enzymes in the network. Although there is great diversity of types of enzymes that make up metabolic networks, the models meant to understand the possible evolutionary outcomes following duplication neglect specifics about the enzyme, pathway context, and cellular constraints. To illuminate the mechanisms that shape the evolution of biochemical pathways, I functionally characterize the consequences of gene duplication of an enzyme family that performs multiple subsequent enzymatic reactions (a multistep enzyme) in the corticosteroid pathway in primates. The products of the corticosteroid pathway (aldosterone and cortisol) are steroid hormones that regulate metabolism and stress response in tetrapods. These steroid hormones are synthesized by a multistep enzyme Cytochrome P450 11B (CYP11B) that performs subsequent steps on different carbon atoms of the steroid derivatives. Through ancestral state reconstruction and in vitro characterization, I find that the primate ancestor of the CYP11B1 and CYP11B2 paralogs had moderate ability to synthesize both cortisol and aldosterone. Following duplication in Old World primates, the CYP11B1 homolog specialized on the production of cortisol, whereas its paralog, CYP11B2, maintained its ability to perform multiple subsequent steps as in the ancestral pathway. Unlike CYP11B1, CYP11B2 could not specialize on the production of aldosterone because it is constrained to perform earlier steps in the corticosteroid synthesis pathway to achieve the final product aldosterone. These results suggest that enzyme function, pathway context, along with tissue-specific regulation, both play a role in shaping potential outcomes of metabolic network elaboration.
代谢网络是复杂的细胞系统,依赖于网络中酶的相互作用和调节。尽管构成代谢网络的酶的类型有很大的多样性,但用于理解复制后可能产生的进化结果的模型忽略了酶的具体情况、途径背景和细胞限制。为了阐明塑造生物化学途径进化的机制,我对在灵长类动物皮质酮途径中执行多个后续酶促反应的酶家族(多步酶)的基因复制的功能特征进行了研究。皮质酮途径的产物(醛固酮和皮质醇)是调节四足动物代谢和应激反应的类固醇激素。这些类固醇激素是由多步酶细胞色素 P450 11B(CYP11B)合成的,该酶在类固醇衍生物的不同碳原子上执行后续步骤。通过祖先状态重建和体外特征描述,我发现 CYP11B1 和 CYP11B2 基因的灵长类祖先具有适度的合成皮质醇和醛固酮的能力。在旧世界灵长类动物中复制后,CYP11B1 同源物专门用于合成皮质醇,而其同源物 CYP11B2 则保持其在祖先途径中执行多个后续步骤的能力。与 CYP11B1 不同,CYP11B2 不能专门用于生成醛固酮,因为它被限制在皮质醇合成途径中执行早期步骤,以达到最终产物醛固酮。这些结果表明,酶功能、途径背景以及组织特异性调节都在塑造代谢网络精细化的潜在结果方面发挥了作用。