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环介导等温DNA扩增技术在炭疽病原体检测与鉴定中的应用。

The use of loop-mediated isothermal DNA amplification for the detection and identification of the anthrax pathogen.

作者信息

Shchit I Yu, Ignatov K B, Kudryavtseva T Yu, Shishkova N A, Mironova R I, Marinin L I, Mokrievich A N, Kramarov V M, Biketov S F, Dyatlov I A

机构信息

1State Research Center of Applied Microbiology and Biotechnology, Federal Service for the Protection of Customer Rights, Obolensk, 142279 Russia.

2Vavilov Institute of General Genetics, Russian Academy of Sciences, Moscow, 117971 Russia.

出版信息

Mol Gen Microbiol Virol. 2017;32(2):100-108. doi: 10.3103/S0891416817020094. Epub 2017 Sep 20.

DOI:10.3103/S0891416817020094
PMID:32214650
原文链接:https://pmc.ncbi.nlm.nih.gov/articles/PMC7088587/
Abstract

The results of detection and identification of strains in loop-mediated isothermal DNA amplification (LAMP) reaction performed under optimized conditions with original primers and thermostable DNA polymerase are presented. Reproducible LAMP-based detection of chromosomal and plasmid DNA targets specific for strains has been demonstrated. No cross reactions with DNA from bacterial strains of other species of the group were detected. The development of tests for anthrax-pathogen detection based on the optimized reaction of loop isothermal DNA amplification is planned. These tests will be convenient for clinical studies and field diagnostics due to the absence of requirements for sophisticated equipment.

摘要

本文展示了在优化条件下使用原始引物和耐热DNA聚合酶进行环介导等温DNA扩增(LAMP)反应时菌株的检测和鉴定结果。已证明基于LAMP可对特定菌株的染色体和质粒DNA靶点进行可重复检测。未检测到与该组其他物种细菌菌株的DNA发生交叉反应。计划基于优化的环等温DNA扩增反应开发炭疽病原体检测试验。由于对精密设备无要求,这些试验将便于临床研究和现场诊断。

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本文引用的文献

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World J Microbiol Biotechnol. 2011 Jun;27(6):1407-13. doi: 10.1007/s11274-010-0592-3. Epub 2010 Oct 21.
2
A strong strand displacement activity of thermostable DNA polymerase markedly improves the results of DNA amplification.热稳定DNA聚合酶的强大链置换活性显著改善了DNA扩增的结果。
Biotechniques. 2014 Aug 1;57(2):81-7. doi: 10.2144/000114198. eCollection 2014 Aug.
3
Loop-mediated isothermal amplification assay for the rapid detection of Staphylococcus aureus.环介导等温扩增检测法快速检测金黄色葡萄球菌。
Biomed Res Int. 2013;2013:895816. doi: 10.1155/2013/895816. Epub 2013 Jan 15.
4
Loop-mediated isothermal amplification for the detection of goose circovirus.环介导等温扩增检测鹅圆环病毒。
Virol J. 2012 Jun 13;9:110. doi: 10.1186/1743-422X-9-110.
5
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J Microbiol Methods. 2012 Sep;90(3):280-4. doi: 10.1016/j.mimet.2012.05.022. Epub 2012 Jun 5.
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One-step detection of the 2009 pandemic influenza A(H1N1) virus by the RT-SmartAmp assay and its clinical validation.一步法 RT-SmartAmp 检测试剂盒用于 2009 年甲型 H1N1 流感病毒的检测及其临床验证。
PLoS One. 2012;7(1):e30236. doi: 10.1371/journal.pone.0030236. Epub 2012 Jan 25.
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