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胃癌微小RNA元特征

Gastric Cancer MicroRNAs Meta-signature.

作者信息

Zare Ali, Ganji Maziar, Omrani Mir Davood, Alipoor Behnam, Ghaedi Hamid

机构信息

Department of Medical Genetics, School of Medicine, Shahid Beheshti University of Medical Sciences, Tehran, Iran.

Urogenital Stem Cell Research Center, Shahid Beheshti University of Medical Sciences, Tehran, Iran.

出版信息

Int J Mol Cell Med. 2019 Spring;8(2):94-102. doi: 10.22088/IJMCM.BUMS.8.2.94. Epub 2019 Aug 24.

Abstract

Gastric cancer (GC) is one of the most common types of cancer and the second leading cause of cancer-associated mortalityIdentification of novel biomarkers is critical to prolonging patient survival. MicroRNAs (miRNAs) proved to play diverse roles in the physiological and pathological state in cancers including GC. Herein we aimed at performing a meta-analysis on miRNA profiling studies that used microarray platforms. Relevant studies were retrieved from PubMed and GEO databases. We used the robust rank aggregation to perform the meta-analysis. Moreover, for meta-signature miRNAs target genes, we performed pathway enrichment and GO molecular function enrichment analysis. A total of 19 upregulated miRNAs and seven downregulated miRNAs in GC samples were identified. However, only three upregulated and one downregulated miRNA reached statistical significance after multiple test correction. Here we showed that hsa-miR-21-5p, hsa-miR-93-5p, hsa-miR-25-3p, and hsa-miR-375 are differentially expressed in GC samples.

摘要

胃癌(GC)是最常见的癌症类型之一,也是癌症相关死亡的第二大主要原因。鉴定新型生物标志物对于延长患者生存期至关重要。事实证明,微小RNA(miRNA)在包括GC在内的癌症的生理和病理状态中发挥着多种作用。在此,我们旨在对使用微阵列平台的miRNA谱研究进行荟萃分析。从PubMed和GEO数据库中检索相关研究。我们使用稳健秩聚合进行荟萃分析。此外,对于元特征miRNA靶基因,我们进行了通路富集和GO分子功能富集分析。在GC样本中总共鉴定出19个上调的miRNA和7个下调的miRNA。然而,经过多重检验校正后,只有3个上调的miRNA和1个下调的miRNA达到统计学显著性。在此我们表明,hsa-miR-21-5p、hsa-miR-93-5p、hsa-miR-25-3p和hsa-miR-375在GC样本中差异表达。

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Gastric Cancer MicroRNAs Meta-signature.胃癌微小RNA元特征
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本文引用的文献

1
The role of MicroRNAs in human cancer.MicroRNAs 在人类癌症中的作用。
Signal Transduct Target Ther. 2016 Jan 28;1:15004. doi: 10.1038/sigtrans.2015.4. eCollection 2016.
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FOXO Signaling Pathways as Therapeutic Targets in Cancer.FOXO 信号通路作为癌症治疗靶点。
Int J Biol Sci. 2017 Jul 6;13(7):815-827. doi: 10.7150/ijbs.20052. eCollection 2017.
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Expression profile of circular RNAs in human gastric cancer tissues.人胃癌组织中环状RNA的表达谱
Mol Med Rep. 2017 Sep;16(3):2469-2476. doi: 10.3892/mmr.2017.6916. Epub 2017 Jul 4.
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miRNA-21 as a novel therapeutic target in lung cancer.微小RNA-21作为肺癌的新型治疗靶点
Lung Cancer (Auckl). 2016 Mar 2;7:19-27. doi: 10.2147/LCTT.S60341. eCollection 2016.

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