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从造纸厂分离得到的、携带HdtS型酰基高丝氨酸内酯合酶的恶臭假单胞菌TS312菌株的全基因组序列

Complete Genome Sequence of Pseudomonas putida Strain TS312, Harboring an HdtS-Type -Acyl-Homoserine Lactone Synthase, Isolated from a Paper Mill.

作者信息

Hosoe Ayaka, Suenaga Toshikazu, Sugi Takumi, Iizumi Taro, Nagai Naohiro, Terada Akihiko

机构信息

Department of Chemical Engineering, Tokyo University of Agriculture and Technology, Koganei, Tokyo, Japan.

Global Innovation Research Institute, Tokyo University of Agriculture and Technology, Fuchu, Tokyo, Japan

出版信息

Microbiol Resour Announc. 2020 Mar 26;9(13):e00055-20. doi: 10.1128/MRA.00055-20.

DOI:10.1128/MRA.00055-20
PMID:32217673
原文链接:https://pmc.ncbi.nlm.nih.gov/articles/PMC7098896/
Abstract

We report the complete genome sequence of strain TS312, in the class of The strain, isolated from a paper mill, harbors the gene, encoding -acyl-homoserine lactone synthase. Deciphering the genome contributes to revealing the mechanisms of quorum sensing and associated biofilm formation in engineered systems.

摘要

我们报告了TS312菌株的完整基因组序列，该菌株属于 类。该菌株从一家造纸厂分离得到，携带编码N-酰基高丝氨酸内酯合酶的基因。对该基因组进行解码有助于揭示工程系统中群体感应及相关生物膜形成的机制。

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Microbiol Resour Announc. 2019 May 16;8(20):e00383-19. doi: 10.1128/MRA.00383-19.
2
Complete Genome Sequences of Bordetella pertussis Clinical Isolate FR5810 and Reference Strain Tohama from Combined Oxford Nanopore and Illumina Sequencing.百日咳博德特氏菌临床分离株FR5810和参考菌株Tohama的全基因组序列：联合牛津纳米孔测序和Illumina测序结果
Microbiol Resour Announc. 2018 Nov 15;7(19). doi: 10.1128/MRA.01207-18. eCollection 2018 Nov.
3
NanoPack: visualizing and processing long-read sequencing data.NanoPack：可视化和处理长读测序数据。
Bioinformatics. 2018 Aug 1;34(15):2666-2669. doi: 10.1093/bioinformatics/bty149.
4
DFAST: a flexible prokaryotic genome annotation pipeline for faster genome publication.DFAST：一个灵活的原核生物基因组注释管道，用于更快地发布基因组。
Bioinformatics. 2018 Mar 15;34(6):1037-1039. doi: 10.1093/bioinformatics/btx713.
5
Canu: scalable and accurate long-read assembly via adaptive -mer weighting and repeat separation.Canu：通过自适应k-mer加权和重复序列分离实现可扩展且准确的长读长序列拼接
Genome Res. 2017 May;27(5):722-736. doi: 10.1101/gr.215087.116. Epub 2017 Mar 15.
6
BUSCO: assessing genome assembly and annotation completeness with single-copy orthologs.BUSCO：利用单拷贝同源基因评估基因组组装和注释的完整性。
Bioinformatics. 2015 Oct 1;31(19):3210-2. doi: 10.1093/bioinformatics/btv351. Epub 2015 Jun 9.
7
Mini-review: microbial problems in paper production.综述：造纸过程中的微生物问题。
Biofouling. 2013;29(6):683-96. doi: 10.1080/08927014.2013.798865. Epub 2013 Jun 20.
8
A mini-review on membrane fouling.膜污染的小型综述。
Bioresour Technol. 2012 Oct;122:27-34. doi: 10.1016/j.biortech.2012.04.089. Epub 2012 May 2.
9
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Appl Environ Microbiol. 2012 Feb;78(3):726-34. doi: 10.1128/AEM.06442-11. Epub 2011 Nov 23.
10
Structural basis of acyl-homoserine lactone-dependent signaling.酰基高丝氨酸内酯依赖性信号传导的结构基础。
Chem Rev. 2011 Jan 12;111(1):68-85. doi: 10.1021/cr1000817. Epub 2010 Dec 2.