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将最优控制理论应用于橡树猝死病的空间模拟模型:持续监测在保护生物多样性的同时保护了加州黑栎。

Applying optimal control theory to a spatial simulation model of sudden oak death: ongoing surveillance protects tanoak while conserving biodiversity.

作者信息

Bussell E H, Cunniffe N J

机构信息

Department of Plant Sciences, University of Cambridge, Cambridge CB2 3EA, UK.

出版信息

J R Soc Interface. 2020 Apr;17(165):20190671. doi: 10.1098/rsif.2019.0671. Epub 2020 Apr 1.

DOI:10.1098/rsif.2019.0671
PMID:32228402
原文链接:https://pmc.ncbi.nlm.nih.gov/articles/PMC7211482/
Abstract

Sudden oak death has devastated tree populations across California. However, management might still slow disease spread at local scales. We demonstrate how to unambiguously characterize effective, local management strategies using a detailed, spatially explicit simulation model of spread in a single forest stand. This pre-existing, parameterized simulation is approximated here by a carefully calibrated, non-spatial model, explicitly constructed to be sufficiently simple to allow optimal control theory (OCT) to be applied. By lifting management strategies from the approximate model to the detailed simulation, effective time-dependent controls can be identified. These protect tanoak-a culturally and ecologically important species-while conserving forest biodiversity within a limited budget. We also consider model predictive control, in which both the approximating model and optimal control are repeatedly updated as the epidemic progresses. This allows management which is robust to both parameter uncertainty and systematic differences between simulation and approximate models. Including the costs of disease surveillance then introduces an optimal intensity of surveillance. Our study demonstrates that successful control of sudden oak death is likely to rely on adaptive strategies updated via ongoing surveillance. More broadly, it illustrates how OCT can inform effective real-world management, even when underpinning disease spread models are highly complex.

摘要

突然橡树死亡病已经摧毁了加利福尼亚州的树木种群。然而,管理措施仍可能在局部范围内减缓疾病传播。我们展示了如何使用单个林分中详细的、空间明确的传播模拟模型,明确地描述有效的局部管理策略。这里,这个预先存在的、参数化的模拟通过一个经过仔细校准的非空间模型来近似,该模型特意构建得足够简单,以便应用最优控制理论(OCT)。通过将管理策略从近似模型提升到详细模拟,可以确定有效的时间依赖控制措施。这些措施在有限预算内保护了鞣皮栎(一种具有文化和生态重要性的物种),同时保护了森林生物多样性。我们还考虑了模型预测控制,即在疫情进展过程中,近似模型和最优控制都反复更新。这使得管理措施对参数不确定性以及模拟模型和近似模型之间的系统差异都具有鲁棒性。纳入疾病监测成本后,进而引入了最优监测强度。我们的研究表明,成功控制突然橡树死亡病可能依赖于通过持续监测更新的适应性策略。更广泛地说,它说明了即使基础疾病传播模型非常复杂,最优控制理论也能为有效的实际管理提供指导。

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本文引用的文献

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Annu Rev Phytopathol. 2019 Aug 25;57:301-321. doi: 10.1146/annurev-phyto-082718-100117. Epub 2019 Jun 21.
2
Optimal control of vaccination in a vector-borne reaction-diffusion model applied to Zika virus.应用于寨卡病毒的媒介传播反应扩散模型中疫苗接种的最优控制
J Math Biol. 2019 Aug;79(3):1077-1104. doi: 10.1007/s00285-019-01390-z. Epub 2019 Jun 11.
3
Optimal control of a vectored plant disease model for a crop with continuous replanting.最优控制连续轮作作物的有向植物病害模型。
J Biol Dyn. 2019;13(sup1):325-353. doi: 10.1080/17513758.2019.1622808. Epub 2019 May 31.
4
Applying optimal control theory to complex epidemiological models to inform real-world disease management.将最优控制理论应用于复杂的流行病学模型,以提供现实世界疾病管理的信息。
Philos Trans R Soc Lond B Biol Sci. 2019 Jul 8;374(1776):20180284. doi: 10.1098/rstb.2018.0284.
5
Improving Management Strategies of Plant Diseases Using Sequential Sensitivity Analyses.利用序列敏感性分析改善植物病害管理策略。
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Modeling Epidemics in Seed Systems and Landscapes To Guide Management Strategies: The Case of Sweet Potato in Northern Uganda.建模种子系统和景观中的传染病以指导管理策略:以乌干达北部的甘薯为例。
Phytopathology. 2019 Sep;109(9):1519-1532. doi: 10.1094/PHYTO-03-18-0072-R. Epub 2019 Aug 13.
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