Sithole Nyaradzai, Williams Claire A, Abbink Truus E M, Lever Andrew M L
Department of Medicine, University of Cambridge, Addenbrooke's Hospital, Cambridge, CB2 0QQ, UK.
Department of Microbiology, Specialist Virology Centre, Norfolk and Norwich University Hospitals, Norwich, UK.
Retrovirology. 2020 Mar 30;17(1):6. doi: 10.1186/s12977-020-00514-4.
HIV-1 does not encode a helicase and hijacks those of the cell for efficient replication. We and others previously showed that the DEAD box helicase, DDX5, is an essential HIV dependency factor. DDX5 was recently shown to be associated with the 7SK snRNP. Cellular positive transcription elongation factor b (P-TEFb) is bound in an inactive form with HEXIM1/2 on 7SK snRNP. The Tat/P-TEFb complex is essential for efficient processivity of Pol II in HIV-1 transcription elongation and Tat competes with HEXIM1/2 for P-TEFb. We investigated the precise role of DDX5 in HIV replication using siRNA mediated knockdown and rescue with DDX5 mutants which prevent protein-protein interactions and RNA and ATP binding.
We demonstrate a critical role for DDX5 in the Tat/HEXIM1 interaction. DDX5 acts to potentiate Tat activity and can bind both Tat and HEXIM1 suggesting it may facilitate the dissociation of HEXIM1/2 from the 7SK-snRNP complex, enhancing Tat/P-TEFb availability. We show knockdown of DDX5 in a T cell line significantly reduces HIV-1 infectivity and viral protein production. This activity is unique to DDX5 and cannot be substituted by its close paralog DDX17. Overexpression of DDX5 stimulates the Tat/LTR promoter but suppresses other cellular and viral promoters. Individual mutations of conserved ATP binding, RNA binding, helicase related or protein binding motifs within DDX5 show that the N terminal RNA binding motifs, the Walker B and the glycine doublet motifs are essential for this function. The Walker A and RNA binding motifs situated on the transactivation domain are however dispensable.
DDX5 is an essential cellular factor for efficient HIV transcription elongation. It interacts with Tat and may potentiate the availability of P-TEFb through sequestering HEXIM1.
HIV-1不编码解旋酶,而是利用细胞的解旋酶来实现高效复制。我们和其他人之前表明,DEAD盒解旋酶DDX5是HIV的一个必需依赖因子。最近发现DDX5与7SK小核核糖核蛋白(snRNP)相关。细胞正性转录延伸因子b(P-TEFb)以无活性形式与7SK snRNP上的HEXIM1/2结合。Tat/P-TEFb复合物对于HIV-1转录延伸过程中Pol II的高效持续性至关重要,并且Tat与HEXIM1/2竞争P-TEFb。我们使用小干扰RNA(siRNA)介导的敲低以及用防止蛋白质-蛋白质相互作用、RNA和ATP结合的DDX5突变体进行拯救,来研究DDX5在HIV复制中的精确作用。
我们证明了DDX5在Tat/HEXIM1相互作用中起关键作用。DDX5起到增强Tat活性的作用,并且可以结合Tat和HEXIM1,这表明它可能促进HEXIM1/2从7SK-snRNP复合物中解离,从而提高Tat/P-TEFb的可用性。我们表明在T细胞系中敲低DDX5会显著降低HIV-1的感染性和病毒蛋白的产生。这种活性是DDX5所特有的,其密切同源物DDX17不能替代它。DDX5的过表达刺激Tat/LTR启动子,但抑制其他细胞和病毒启动子。DDX5内保守的ATP结合、RNA结合、解旋酶相关或蛋白质结合基序的单个突变表明,N端RNA结合基序、沃克B基序和甘氨酸双峰基序对于此功能至关重要。然而,位于反式激活结构域上的沃克A基序和RNA结合基序是可有可无的。
DDX5是HIV高效转录延伸所必需的细胞因子。它与Tat相互作用,并可能通过隔离HEXIM1来提高P-TEFb的可用性。