Hirose Yuu, Shiozaki Takuhei, Otani Masahiro, Kudoh Sakae, Imura Satoshi, Eki Toshihiko, Harada Naomi
Department of Applied Chemistry and Life Science, Toyohashi University of Technology, 1-1 Hibarigaoka, Tempaku, Toyohashi, Aichi 441-8580, Japan.
Earth Surface System Research Center, Japan Agency for Marine-Earth Science and Technology, 2-15 Natsushima-cho, Yokosuka, Kanagawa 237-0061, Japan.
Microorganisms. 2020 Mar 31;8(4):497. doi: 10.3390/microorganisms8040497.
Antarctica has one of the most extreme environments on Earth, with low temperatures and low nutrient levels. Antarctica's organisms live primarily in the coastal, ice-free areas which cover approximately 0.18% of the continent's surface. Members of Cyanobacteria and eukaryotic algae are important primary producers in Antarctica since they can synthesize organic compounds from carbon dioxide and water using solar energy. However, community structures of photosynthetic algae in Antarctica have not yet been fully explored at molecular level. In this study, we collected diverse algal samples in lacustrine and hydro-terrestrial environments of Langhovde and Skarvsnes, which are two ice-free regions in East Antarctica. We performed deep amplicon sequencing of both 16S ribosomal ribonucleic acid (rRNA) and 18S rRNA genes, and we explored the distribution of sequence variants (SVs) of these genes at single nucleotide difference resolution. SVs of filamentous Cyanobacteria genera, including , , , , , and , were identified in most of the samples, whereas SVs were distributed in fewer samples. We also detected unicellular, multicellular or heterocyst forming Cyanobacteria strains, but in relatively small abundance. For SVs of eukaryotic algae, Chlorophyta, Cryptophyta, and Ochrophyta were widely distributed among the collected samples. In addition, there was a red colored bloom of eukaryotic alga, (Cryptophyta), in the Langhovde coastal area. Eukaryotic SVs of and/or of Tardigrada were dominant among most of the samples. Our data revealed the detailed structures of the algal communities in Langhovde and Skarvsnes. This will contribute to our understanding of Antarctic ecosystems and support further research into this subject.
南极洲拥有地球上最极端的环境之一,温度低且营养水平低。南极洲的生物主要生活在沿海无冰区域,这些区域约占该大陆表面积的0.18%。蓝细菌和真核藻类是南极洲重要的初级生产者,因为它们可以利用太阳能从二氧化碳和水中合成有机化合物。然而,南极洲光合藻类的群落结构在分子水平上尚未得到充分探索。在本研究中,我们在朗霍夫德和斯卡夫斯内斯的湖泊和水陆环境中收集了多样的藻类样本,这两个地区是东南极洲的无冰区域。我们对16S核糖体核糖核酸(rRNA)和18S rRNA基因进行了深度扩增子测序,并在单核苷酸差异分辨率下探索了这些基因的序列变体(SVs)分布。在大多数样本中鉴定出丝状蓝细菌属的SVs,包括 、 、 、 、 和 ,而 SVs分布在较少的样本中。我们还检测到单细胞、多细胞或形成异形胞的蓝细菌菌株,但丰度相对较小。对于真核藻类的SVs,绿藻门、隐藻门和褐藻门在收集的样本中广泛分布。此外,朗霍夫德沿海地区出现了真核藻类 (隐藻门)的红色水华。缓步动物门的 和/或 的真核SVs在大多数样本中占主导地位。我们的数据揭示了朗霍夫德和斯卡夫斯内斯藻类群落的详细结构。这将有助于我们理解南极生态系统,并支持对此主题的进一步研究。