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比较高通量分析克氏锥虫对有机金属化合物的反应。

Comparative high-throughput analysis of the Trypanosoma cruzi response to organometallic compounds.

机构信息

Laboratorio de Interacciones Moleculares, Facultad de Ciencias, Universidad de la República, Montevideo, Uruguay.

出版信息

Metallomics. 2020 May 27;12(5):813-828. doi: 10.1039/d0mt00030b.

Abstract

There is an urgent need to develop new drugs against Chagas' disease. In addition, the mechanisms of action of existing drugs have not been completely worked out at the molecular level. High throughput approaches have been demonstrated to be powerful tools not only for understanding the basic biology of Trypanosoma cruzi, but also for the identification of drug targets such as proteins or pathways that are essential for parasite infection and survival within the mammalian host. Here, we have applied these tools towards the discovery of the effects of two organometallic compounds with trypanocidal activity, Pd-dppf-mpo and Pt-dppf-mpo, on the transcriptome and proteome of T. cruzi epimastigotes. These approaches have not yet been reported for any other prospective metal-based anti T. cruzi drug. We found differentially expressed transcripts and proteins in treated parasites. Pd-dppf-mpo treatment resulted in more modulated transcripts (2327 of 10 785 identified transcripts) than Pt-dppf-mpo treatment (201 of 10 773 identified transcripts) suggesting a mechanism of action for Pd-dppf-mpo at the transcriptome level. Similar numbers of differentially expressed proteins (342 and 411 for Pd-dppf-mpo and Pt-dppf-mpo respectively) were also observed. We further functionally categorized differentially expressed transcripts and identified cellular processes and pathways significantly impacted by treatment with the compounds. Transcripts involved in DNA binding, protein metabolism, transmembrane transport, oxidative defense, and the ergosterol pathways were found to be modulated by the presence of the compounds. Our transcriptomic dataset also contained previously validated essential genes. These data allowed us to hypothesize a multimodal mechanism of action for the trypanocidal activity of Pd-dppf-mpo and Pt-dppf-mpo, and a differential contribution of the metal moiety of each compound.

摘要

目前迫切需要开发针对恰加斯病的新药。此外,现有药物的作用机制在分子水平上尚未完全阐明。高通量方法不仅已被证明是了解克氏锥虫基本生物学的有力工具,而且还可用于鉴定药物靶标,如蛋白质或途径,这些靶标对于寄生虫在哺乳动物宿主内的感染和生存至关重要。在这里,我们将这些工具应用于两种具有杀锥虫活性的有机金属化合物 Pd-dppf-mpo 和 Pt-dppf-mpo 对 T. cruzi 鞭毛体转录组和蛋白质组的影响的发现。迄今为止,尚未有任何其他有前途的基于金属的抗 T. cruzi 药物报告过这些方法。我们发现处理过的寄生虫中存在差异表达的转录本和蛋白质。Pd-dppf-mpo 处理导致更多的调节转录本(10785 个鉴定转录本中的 2327 个)比 Pt-dppf-mpo 处理(10773 个鉴定转录本中的 201 个)更多,这表明 Pd-dppf-mpo 在转录组水平上的作用机制。也观察到差异表达的蛋白质数量相似(Pd-dppf-mpo 和 Pt-dppf-mpo 分别为 342 和 411)。我们进一步对差异表达的转录本进行了功能分类,并确定了化合物处理显著影响的细胞过程和途径。发现与 DNA 结合、蛋白质代谢、跨膜转运、氧化防御和麦角固醇途径相关的转录本受到化合物的调节。我们的转录组数据集还包含先前验证的必需基因。这些数据使我们能够假设 Pd-dppf-mpo 和 Pt-dppf-mpo 的杀锥虫活性具有多模式作用机制,并且每种化合物的金属部分的贡献也不同。

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