Bolmatov Dima, Soloviov Dmytro, Zhernenkov Mikhail, Zav'yalov Dmitry, Mamontov Eugene, Suvorov Alexey, Cai Yong Q, Katsaras John
Large Scale Structures Group, Neutron Scattering Division, Oak Ridge National Laboratory, Oak Ridge, Tennessee 37831, United States.
Department of Physics and Astronomy, University of Tennessee, Knoxville, Tennessee 37996, United States.
Langmuir. 2020 May 12;36(18):4887-4896. doi: 10.1021/acs.langmuir.0c00125. Epub 2020 Apr 14.
In biological membranes, lipid rafts are now thought to be transient and nanoscopic. However, the mechanism responsible for these nanoscopic assemblies remains poorly understood, even in the case of model membranes. As a result, it has proven extremely challenging to probe the physicochemical properties of lipid rafts at the molecular level. Here, we use all-atom molecular dynamics (MD) simulations and inelastic X-ray scattering (IXS), an intrinsically nanoscale technique, to directly probe the energy transfer and collective short-wavelength dynamics (phonons) of biologically relevant model membranes. We show that the nanoscale propagation of stress in lipid rafts takes place in the form of collective motions made up of longitudinal (compression waves) and transverse (shear waves) molecular vibrations. Importantly, we provide a molecular picture for the so-called van der Waals mediated "force from lipid" [Anishkin, A. et al. 2014, 111, 7898], a key parameter for the ionic channel mechano-transduction and the mechanism for the lipid transfer of molecular level stress [Aponte-Santamarı́a, C. et al. 2017, 139, 13588]. Specifically, we describe how lipid rafts are formed and maintained through the propagation of molecular stress, lipid raft rattling dynamics, and a relaxation process. Eventually, the rafts dissipate through the self-diffusion of lipids making up the rafts. We also show that the molecular stress and viscoelastic properties of transient lipid rafts can be modulated through the use of hydrophobic biomolecules such as melatonin and tryptophan. Ultimately, the herein proposed mechanism describing the molecular interactions for the formation and dissolution of lipid rafts may offer insights as to how lipid rafts enable biological function.
在生物膜中,脂质筏现在被认为是瞬态且纳米级的。然而,即使在模型膜的情况下,负责这些纳米级组装的机制仍知之甚少。因此,在分子水平上探测脂质筏的物理化学性质已被证明极具挑战性。在这里,我们使用全原子分子动力学(MD)模拟和非弹性X射线散射(IXS,一种本质上的纳米级技术)来直接探测生物相关模型膜的能量转移和集体短波长动力学(声子)。我们表明,脂质筏中应力的纳米级传播以由纵向(压缩波)和横向(剪切波)分子振动组成的集体运动形式发生。重要的是,我们为所谓的范德华介导的“来自脂质的力”[阿尼什金,A.等人,2014年,111,7898]提供了一个分子图景,这是离子通道机械转导的关键参数以及分子水平应力脂质转移的机制[阿庞特-圣玛丽亚,C.等人,2017年,139,13588]。具体来说,我们描述了脂质筏如何通过分子应力的传播、脂质筏晃动动力学和一个弛豫过程形成并维持。最终,脂质筏通过构成脂质筏的脂质的自扩散而消散。我们还表明,瞬态脂质筏的分子应力和粘弹性性质可以通过使用诸如褪黑素和色氨酸等疏水性生物分子来调节。最终,本文提出的描述脂质筏形成和溶解的分子相互作用的机制可能为脂质筏如何实现生物学功能提供见解。