GIMAP EA 3064 (Groupe Immunité des Muqueuses et Agents Pathogènes), University of Lyon, 42023, Saint-Etienne, France.
BioSpeedia, Institut Pasteur, 75015, Paris, France.
BMC Microbiol. 2020 Apr 7;20(1):79. doi: 10.1186/s12866-020-01764-0.
Despite vaccination programs, Streptococcus pneumoniae remains among the main microorganisms involved in bacterial pneumonia, notably in terms of severity. The prognosis of pneumococcal infections is conditioned in part by the precocity of the diagnosis. The aim of this study was to evaluate the impact of a Rapid Diagnostic Test (RDT) targeting cell wall polysaccharide of Streptococcus pneumoniae and performed directly in respiratory samples, on the strategy of diagnosis of respiratory pneumococcal infections in children.
Upper-respiratory tract samples from 196 children consulting at hospital for respiratory infection were tested for detecting S. pneumoniae using a newly-designed RDT (PneumoResp, Biospeedia), a semi-quantitative culture and two PCR assays. If positive on fluidized undiluted specimen, the RDT was repeated on 1:100-diluted sample. The RDT was found highly specific when tested on non-S. pneumoniae strains. By comparison to culture and PCR assays, the RDT on undiluted secretions exhibited a sensitivity (Se) and negative predictive value (NPV) of more than 98%. By comparison to criteria of S. pneumoniae pneumonia combining typical symptoms, X-ray image, and culture ≥10 CFU/ml, the Se and NPV of RDT on diluted specimens were 100% in both cases.
In case of negative result, the excellent NPV of RDT on undiluted secretions allows excluding S. pneumoniae pneumonia. In case of positive result, the excellent sensitivity of RDT on diluted secretions for the diagnosis of S. pneumoniae pneumonia allows proposing a suitable antimicrobial treatment at day 0.
尽管有疫苗接种计划,但肺炎链球菌仍然是细菌性肺炎的主要微生物之一,尤其是在严重程度方面。肺炎链球菌感染的预后部分取决于早期诊断。本研究旨在评估针对肺炎链球菌细胞壁多糖的快速诊断检测(RDT)对儿童呼吸道肺炎链球菌感染诊断策略的影响。
对 196 名因呼吸道感染到医院就诊的儿童的上呼吸道样本进行了检测,以使用新设计的 RDT(PneumoResp,Biospeedia)、半定量培养和两种 PCR 检测方法检测 S. pneumoniae。如果在未稀释的标本中呈阳性,则在 1:100 稀释的标本上重复进行 RDT。当测试非 S. pneumoniae 菌株时,RDT 表现出高度特异性。与培养和 PCR 检测相比,未稀释分泌物上的 RDT 具有超过 98%的敏感性(Se)和阴性预测值(NPV)。与结合典型症状、X 射线图像和培养≥10 CFU/ml 的肺炎链球菌肺炎标准相比,在稀释标本上进行 RDT 的 Se 和 NPV 在两种情况下均为 100%。
如果结果为阴性,则 RDT 在未稀释分泌物上的出色 NPV 可排除肺炎链球菌肺炎。如果结果为阳性,则 RDT 在稀释分泌物上对肺炎链球菌肺炎的诊断具有出色的敏感性,可在第 0 天提出适当的抗菌治疗建议。