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专业实验室网络作为备灾和应对工具——新兴病毒疾病专家实验室网络和 2019 年泰国基孔肯雅热疫情。

Specialist laboratory networks as preparedness and response tool - the Emerging Viral Diseases-Expert Laboratory Network and the Chikungunya outbreak, Thailand, 2019.

机构信息

Department of Infectious Diseases, Istituto Superiore di Sanità, Rome, Italy.

Center for Virology, Medical University of Vienna, Vienna, Austria.

出版信息

Euro Surveill. 2020 Apr;25(13). doi: 10.2807/1560-7917.ES.2020.25.13.1900438.

DOI:10.2807/1560-7917.ES.2020.25.13.1900438
PMID:32265004
原文链接:https://pmc.ncbi.nlm.nih.gov/articles/PMC7140599/
Abstract

We illustrate the potential for specialist laboratory networks to be used as preparedness and response tool through rapid collection and sharing of data. Here, the Emerging Viral Diseases-Expert Laboratory Network (EVD-LabNet) and a laboratory assessment of chikungunya virus (CHIKV) in returning European travellers related to an ongoing outbreak in Thailand was used for this purpose. EVD-LabNet rapidly collected data on laboratory requests, diagnosed CHIKV imported cases and sequences generated, and shared among its members and with the European Centre for Disease Prevention and Control. Data across the network showed an increase in CHIKV imported cases during 1 October 2018-30 April 2019 vs the same period in 2018 (172 vs 50), particularly an increase in cases known to be related to travel to Thailand (72 vs 1). Moreover, EVD-LabNet showed that strains were imported from Thailand that cluster with strains of the ECSA-IOL E1 A226 variant emerging in Pakistan in 2016 and involved in the 2017 outbreaks in Italy. CHIKV diagnostic requests increased by 23.6% between the two periods. The impact of using EVD-LabNet or similar networks as preparedness and response tool could be improved by standardisation of the collection, quality and mining of data in routine laboratory management systems.

摘要

我们通过快速收集和共享数据,说明了专门的实验室网络作为准备和应对工具的潜力。在这里,新兴病毒疾病-专家实验室网络(EVD-LabNet)和对与正在泰国发生的疫情有关的返回欧洲旅行者的基孔肯雅病毒(CHIKV)进行的实验室评估被用于此目的。EVD-LabNet 迅速收集了有关实验室请求、诊断输入性 CHIKV 病例和生成的序列的数据,并在其成员之间以及与欧洲疾病预防控制中心共享。整个网络的数据显示,2018 年 10 月 1 日至 2019 年 4 月 30 日期间输入性 CHIKV 病例比 2018 年同期(172 例比 50 例)有所增加,特别是与前往泰国旅行有关的病例有所增加(72 例比 1 例)。此外,EVD-LabNet 显示,从泰国输入的病毒株与 2016 年在巴基斯坦出现的 ECSA-IOL E1 A226 变体中的病毒株聚集在一起,并与 2017 年意大利的疫情有关。在此期间,CHIKV 诊断请求增加了 23.6%。通过在常规实验室管理系统中标准化数据的收集、质量和挖掘,可以提高使用 EVD-LabNet 或类似网络作为准备和应对工具的效果。

https://cdn.ncbi.nlm.nih.gov/pmc/blobs/1567/7140599/6216e6595ce9/1900438-f1.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/1567/7140599/6216e6595ce9/1900438-f1.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/1567/7140599/6216e6595ce9/1900438-f1.jpg

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