Faculty of Pharmaceutical Sciences of Ribeirão Preto, University of São Paulo.
Biotechnology Institute, University of Minnesota.
Microbes Environ. 2020;35(2). doi: 10.1264/jsme2.ME19143.
Atrazine is a triazine herbicide that is widely used to control broadleaf weeds. Its widespread use over the last 50 years has led to the potential contamination of soils, groundwater, rivers, and lakes. Its main route of complete degradation is via biological means, which is carried out by soil microbiota using a 6-step pathway. The aim of the present study was to investigate whether application of atrazine to soil changes the soil bacterial community. We used 16S rRNA gene sequencing and qPCR to elucidate the microbial community structure and assess the abundance of the atrazine degradation genes atzA, atzD, and trzN in a Brazilian soil. The results obtained showed that the relative abundance of atzA and trzN, encoding triazine-initiating metabolism in Gram-negative and -positive bacteria, respectively, increased in soil during the first weeks following the application of atrazine. In contrast, the abundance of atzD, encoding cyanuric acid amidohydrolase-the fourth step in the pathway-was not related to the atrazine treatment. Moreover, the overall soil bacterial community showed no significant changes after the application of atrazine. Despite this, we observed increases in the relative abundance of bacterial families in the 4 and 8 weeks following the atrazine treatment, which may have been related to higher copy numbers of atzA and trzN, in part due to the release of nitrogen from the herbicide. The present results revealed that while the application of atrazine may temporarily increase the quantities of the atzA and trzN genes in a Brazilian Red Latosol soil, it does not lead to significant and long-term changes in the bacterial community structure.
莠去津是一种三嗪类除草剂,广泛用于控制阔叶杂草。在过去的 50 年中,它的广泛使用导致了土壤、地下水、河流和湖泊的潜在污染。它的主要完全降解途径是通过生物手段,这是由土壤微生物群落通过 6 步途径进行的。本研究旨在调查莠去津施用于土壤是否会改变土壤细菌群落。我们使用 16S rRNA 基因测序和 qPCR 来阐明微生物群落结构,并评估巴西土壤中莠去津降解基因 atzA、atzD 和 trzN 的丰度。结果表明,在莠去津施用于土壤后的最初几周内,编码革兰氏阴性和阳性细菌中三嗪起始代谢的 atzA 和 trzN 的相对丰度增加。相比之下,编码氰尿酸 amidohydrolase-该途径的第四步的 atzD 的丰度与莠去津处理无关。此外,莠去津处理后土壤细菌群落整体无明显变化。尽管如此,我们观察到在莠去津处理后的 4 周和 8 周,细菌科的相对丰度增加,这可能与 atzA 和 trzN 的拷贝数增加有关,部分原因是除草剂释放的氮。本研究结果表明,虽然莠去津的施用可能会暂时增加巴西红壤土壤中 atzA 和 trzN 基因的数量,但不会导致细菌群落结构发生显著和长期的变化。