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基于结构的乳腺癌蛋白靶向内分泌干扰农药的鉴定。

Structure-based Identification of Endocrine Disrupting Pesticides Targeting Breast Cancer Proteins.

机构信息

Environmental and Computational Chemistry Group, School of Pharmaceutical Sciences, Zaragocilla Campus, University of Cartagena, Cartagena, 130015, Colombia.

Environmental and Computational Chemistry Group, School of Pharmaceutical Sciences, Zaragocilla Campus, University of Cartagena, Cartagena, 130015, Colombia.

出版信息

Toxicology. 2020 Jun;439:152459. doi: 10.1016/j.tox.2020.152459. Epub 2020 Apr 9.

Abstract

Endocrine disrupting pesticides (EDPs) are exogenous compounds that disrupt endocrine activity. Human exposure to EDPs can occur through occupational contact, and through the consumption of food, milk and water with trace amounts of these pollutants. Several EDPs are epidemiologically linked to breast cancer or are considered as possible carcinogens. However, current evidence is not fully conclusive and their mechanisms of action remain unknown. Thus, the potential interactions between 262 EDPs and 189 proteins associated with breast cancer were evaluated by using a virtual high-throughput screening approach, with AutoDock Vina 1.1.1. The molecular coordinates were previously downloaded from Protein Data Bank and EDCs DataBank, and used for preparation and optimization in Sybyl X-2.0. The best affinity score (-11.0 kcal/mol) was obtained for flucythrinate with the nuclear receptor for vitamin D (VDR). This synthetic pyrethroid, along with other EDPs, such as fluvalinate, bifenthrin, cyhalothrin and cypermethrin, are proposed as multi-target ligands of several proteins related to breast cancer. In addition, the validation of our protocol showed a good accuracy in terms of binding pose prediction and affinity estimation. This study provides a guide to prioritize EDPs for which further in vitro and in vivo analysis could be done to evaluate the risk and possible mechanisms of action of these contaminants and their potential association with breast cancer.

摘要

内分泌干扰农药(EDPs)是一种外源性化合物,会扰乱内分泌活动。人类可以通过职业接触和摄入含有痕量这些污染物的食物、牛奶和水来接触 EDPs。一些 EDPs 与乳腺癌有关联,或者被认为是可能的致癌物质。然而,目前的证据并不完全确凿,它们的作用机制仍不清楚。因此,我们使用虚拟高通量筛选方法(AutoDock Vina 1.1.1),评估了 262 种 EDPs 和 189 种与乳腺癌相关的蛋白质之间的潜在相互作用。分子坐标先前从蛋白质数据库和 EDCs 数据库下载,并在 Sybyl X-2.0 中进行准备和优化。氟氯氰菊酯与维生素 D 核受体(VDR)的亲和力得分最高(-11.0 kcal/mol)。这种合成拟除虫菊酯,以及其他 EDPs,如氟氯氰菊酯、溴氰菊酯、氯氰菊酯和氯菊酯,被提议为与乳腺癌相关的几种蛋白质的多靶标配体。此外,我们的方案验证表明,在结合构象预测和亲和力估计方面具有良好的准确性。这项研究为优先考虑 EDPs 提供了指导,以便进一步进行体外和体内分析,评估这些污染物的风险和可能的作用机制,以及它们与乳腺癌的潜在关联。

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