Suppr超能文献

两种免疫能力不同的近缘甲虫在遭受 Asecodes parviclava 攻击后的免疫基因差异表达。

Differential Expression of Immune Genes between Two Closely Related Beetle Species with Different Immunocompetence following Attack by Asecodes parviclava.

机构信息

Department of Ecology, Environment and Plant Sciences, Stockholm University, Sweden.

Department of Molecular Biosciences, The Wenner-Gren Institute, Stockholm University, Sweden.

出版信息

Genome Biol Evol. 2020 May 1;12(5):522-534. doi: 10.1093/gbe/evaa075.

Abstract

Endoparasitoid wasps are important natural enemies of many insect species and are major selective forces on the host immune system. Despite increased interest in insect antiparasitoid immunity, there is sparse information on the evolutionary dynamics of biological pathways and gene regulation involved in host immune defense outside Drosophila species. We de novo assembled transcriptomes from two beetle species and used time-course differential expression analysis to investigate gene expression differences in closely related species Galerucella pusilla and G. calmariensis that are, respectively, resistant and susceptible against parasitoid infection by Asecodes parviclava parasitoids. Approximately 271 million and 224 million paired-ended reads were assembled and filtered to form 52,563 and 59,781 transcripts for G. pusilla and G. calmariensis, respectively. In the whole-transcriptome level, an enrichment of functional categories related to energy production, biosynthetic process, and metabolic process was exhibited in both species. The main difference between species appears to be immune response and wound healing process mounted by G. pusilla larvae. Using reciprocal BLAST against the Drosophila melanogaster proteome, 120 and 121 immune-related genes were identified in G. pusilla and G. calmariensis, respectively. More immune genes were differentially expressed in G. pusilla than in G. calmariensis, in particular genes involved in signaling, hematopoiesis, and melanization. In contrast, only one gene was differentially expressed in G. calmariensis. Our study characterizes important genes and pathways involved in different immune functions after parasitoid infection and supports the role of signaling and hematopoiesis genes as key players in host immunity in Galerucella against parasitoid wasps.

摘要

内寄生蜂是许多昆虫物种的重要天敌,也是宿主免疫系统的主要选择压力。尽管人们对昆虫抗寄生虫免疫的兴趣日益增加,但在非果蝇物种中,涉及宿主免疫防御的生物学途径和基因调控的进化动态信息仍然很少。我们从头组装了两种甲虫的转录组,并使用时间过程差异表达分析来研究密切相关的物种 Galerucella pusilla 和 G. calmariensis 中的基因表达差异,这两个物种分别对 Asecodes parviclava 寄生蜂的寄生感染具有抗性和敏感性。分别组装和过滤了约 2.71 亿和 2.24 亿对末端读取,形成了 G. pusilla 和 G. calmariensis 的 52,563 和 59,781 个转录本。在全转录组水平上,两个物种都表现出与能量产生、生物合成过程和代谢过程相关的功能类别富集。物种之间的主要区别似乎是 G. pusilla 幼虫启动的免疫反应和伤口愈合过程。使用对 Drosophila melanogaster 蛋白质组的反向 BLAST,在 G. pusilla 和 G. calmariensis 中分别鉴定了 120 和 121 个免疫相关基因。G. pusilla 中的免疫基因差异表达多于 G. calmariensis,特别是涉及信号转导、造血和黑化的基因。相比之下,G. calmariensis 中只有一个基因差异表达。我们的研究描述了寄生蜂感染后不同免疫功能涉及的重要基因和途径,并支持信号转导和造血基因作为 Galerucella 宿主免疫中关键因素的作用。

https://cdn.ncbi.nlm.nih.gov/pmc/blobs/24f6/7211424/26ec9157e072/evaa075f1.jpg

文献检索

告别复杂PubMed语法,用中文像聊天一样搜索,搜遍4000万医学文献。AI智能推荐,让科研检索更轻松。

立即免费搜索

文件翻译

保留排版,准确专业,支持PDF/Word/PPT等文件格式,支持 12+语言互译。

免费翻译文档

深度研究

AI帮你快速写综述,25分钟生成高质量综述,智能提取关键信息,辅助科研写作。

立即免费体验