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通过 SARS-CoV-2 刺突糖蛋白和 3CL 蛋白酶的计算机分子对接模型寻找治疗 COVID-19 的药物。

A search for medications to treat COVID-19 via in silico molecular docking models of the SARS-CoV-2 spike glycoprotein and 3CL protease.

机构信息

Department of Chemistry, Drexel University, Philadelphia, PA, 19104, USA.

Department of Chemistry, Drexel University, Philadelphia, PA, 19104, USA.

出版信息

Travel Med Infect Dis. 2020 May-Jun;35:101646. doi: 10.1016/j.tmaid.2020.101646. Epub 2020 Apr 12.

Abstract

BACKGROUND

The COVID-19 has now been declared a global pandemic by the World Health Organization. There is an emergent need to search for possible medications.

METHOD

Utilization of the available sequence information, homology modeling, and in slico docking a number of available medications might prove to be effective in inhibiting the SARS-CoV-2 two main drug targets, the spike glycoprotein, and the 3CL protease.

RESULTS

Several compounds were determined from the in silico docking models that might prove to be effective inhibitors for SARS-CoV-2. Several antiviral medications: Zanamivir, Indinavir, Saquinavir, and Remdesivir show potential as and 3CL main proteinase inhibitors and as a treatment for COVID-19.

CONCLUSION

Zanamivir, Indinavir, Saquinavir, and Remdesivir are among the exciting hits on the 3CL main proteinase. It is also exciting to uncover that Flavin Adenine Dinucleotide (FAD) Adeflavin, B2 deficiency medicine, and Coenzyme A, a coenzyme, may also be potentially used for the treatment of SARS-CoV-2 infections. The use of these off-label medications may be beneficial in the treatment of the COVID-19.

摘要

背景

世界卫生组织已宣布 COVID-19 为全球大流行疾病。因此,人们急需寻找可能有效的治疗药物。

方法

利用现有的序列信息、同源建模和计算机对接技术,对多种现有药物进行分析,这些药物可能对抑制 SARS-CoV-2 的两个主要药物靶点,刺突糖蛋白和 3CL 蛋白酶有效。

结果

从计算机对接模型中确定了几种可能对 SARS-CoV-2 有效的抑制剂。几种抗病毒药物:扎那米韦、茚地那韦、沙奎那韦和瑞德西韦,可能成为 3CL 主要蛋白酶的有效抑制剂,并可能成为 COVID-19 的治疗药物。

结论

扎那米韦、茚地那韦、沙奎那韦和瑞德西韦是 3CL 主要蛋白酶的潜在有效抑制剂。另一个令人兴奋的发现是黄素腺嘌呤二核苷酸(FAD)Adeflavin、B2 缺乏症药物和辅酶 A(一种辅酶)也可能可用于治疗 SARS-CoV-2 感染。这些非标签药物的使用可能对 COVID-19 的治疗有益。

https://cdn.ncbi.nlm.nih.gov/pmc/blobs/b551/7152904/39fcc787fbb4/gr1_lrg.jpg

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