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基于生成模型的胸部CT图像气道和血管形态量化

Generative-based airway and vessel morphology quantification on chest CT images.

作者信息

Nardelli Pietro, Ross James C, San José Estépar Raúl

机构信息

Applied Chest Imaging Laboratory, Brigham and Women's Hospital, Harvard Medical School, Boston, MA 02115, USA.

Applied Chest Imaging Laboratory, Brigham and Women's Hospital, Harvard Medical School, Boston, MA 02115, USA.

出版信息

Med Image Anal. 2020 Jul;63:101691. doi: 10.1016/j.media.2020.101691. Epub 2020 Mar 28.

Abstract

Accurately and precisely characterizing the morphology of small pulmonary structures from Computed Tomography (CT) images, such as airways and vessels, is becoming of great importance for diagnosis of pulmonary diseases. The smaller conducting airways are the major site of increased airflow resistance in chronic obstructive pulmonary disease (COPD), while accurately sizing vessels can help identify arterial and venous changes in lung regions that may determine future disorders. However, traditional methods are often limited due to image resolution and artifacts. We propose a Convolutional Neural Regressor (CNR) that provides cross-sectional measurement of airway lumen, airway wall thickness, and vessel radius. CNR is trained with data created by a generative model of synthetic structures which is used in combination with Simulated and Unsupervised Generative Adversarial Network (SimGAN) to create simulated and refined airways and vessels with known ground-truth. For validation, we first use synthetically generated airways and vessels produced by the proposed generative model to compute the relative error and directly evaluate the accuracy of CNR in comparison with traditional methods. Then, in-vivo validation is performed by analyzing the association between the percentage of the predicted forced expiratory volume in one second (FEV1%) and the value of the Pi10 parameter, two well-known measures of lung function and airway disease, for airways. For vessels, we assess the correlation between our estimate of the small-vessel blood volume and the lungs' diffusing capacity for carbon monoxide (DLCO). The results demonstrate that Convolutional Neural Networks (CNNs) provide a promising direction for accurately measuring vessels and airways on chest CT images with physiological correlates.

摘要

从计算机断层扫描(CT)图像中准确且精确地表征肺部小结构(如气道和血管)的形态,对于肺部疾病的诊断变得极为重要。较小的传导气道是慢性阻塞性肺疾病(COPD)中气流阻力增加的主要部位,而准确测量血管大小有助于识别肺部区域可能决定未来疾病的动脉和静脉变化。然而,由于图像分辨率和伪影,传统方法往往受到限制。我们提出了一种卷积神经回归器(CNR),它可以提供气道管腔、气道壁厚度和血管半径的横截面测量。CNR使用由合成结构生成模型创建的数据进行训练,该模型与模拟和无监督生成对抗网络(SimGAN)结合使用,以创建具有已知真实值的模拟和细化气道及血管。为了进行验证,我们首先使用所提出的生成模型生成的合成气道和血管来计算相对误差,并与传统方法相比直接评估CNR的准确性。然后,通过分析预测的一秒用力呼气量百分比(FEV1%)与Pi10参数值之间的关联进行体内验证,Pi10参数是两种著名的肺功能和气道疾病测量指标。对于血管,我们评估我们对小血管血容量的估计与肺一氧化碳弥散量(DLCO)之间的相关性。结果表明,卷积神经网络(CNNs)为在胸部CT图像上准确测量血管和气道并与生理相关性提供了一个有前景的方向。

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