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黄萎轮枝菌染色质重塑有助于植物活性氧胁迫下的 DNA 损伤修复。

Verticillium dahliae chromatin remodeling facilitates the DNA damage repair in response to plant ROS stress.

机构信息

State Key Laboratory of Plant Genomics, Institute of Microbiology, Chinese Academy of Sciences, Beijing, China.

CAS Center for Excellence in Biotic Interactions, University of the Chinese Academy of Sciences, Beijing, China.

出版信息

PLoS Pathog. 2020 Apr 16;16(4):e1008481. doi: 10.1371/journal.ppat.1008481. eCollection 2020 Apr.

Abstract

Reactive oxygen species (ROS) production is one of the earliest responses when plants percept pathogens and acts as antimicrobials to block pathogen entry. However, whether and how pathogens tolerate ROS stress remains elusive. Here, we report the chromatin remodeling in Verticillium dahliae, a soil-borne pathogenic fungus that causes vascular wilts of a wide range of plants, facilitates the DNA damage repair in response to plant ROS stress. We identified VdDpb4, encoding a histone-fold protein of the ISW2 chromatin remodeling complex in V. dahliae, is a virulence gene. The reduced virulence in wild type Arabidopsis plants arising from VdDpb4 deletion was impaired in the rbohd mutant plants that did not produce ROS. Further characterization of VdDpb4 and its interacting protein, VdIsw2, an ATP-dependent chromatin-remodeling factor, we show that while the depletion of VdIsw2 led to the decondensing of chromatin, the depletion of VdDpb4 resulted in a more compact chromatin structure and affected the VdIsw2-dependent transcriptional effect on gene expression, including genes involved in DNA damage repair. A knockout mutant of either VdDpb4 or VdIsw2 reduced the efficiency of DNA repair in the presence of DNA-damaging agents and virulence during plant infection. Together, our data demonstrate that VdDpb4 and VdIsw2 play roles in maintaining chromatin structure for positioning nucleosomes and transcription regulation, including genes involved in DNA repair in response to ROS stress during development and plant infection.

摘要

活性氧(ROS)的产生是植物感知病原体后的最早反应之一,作为抗菌物质来阻止病原体进入。然而,病原体是否以及如何耐受 ROS 应激仍然难以捉摸。在这里,我们报告了一种土壤传播的致病真菌——黄萎轮枝菌中的染色质重塑,该真菌会导致广泛植物的维管束萎蔫,从而促进对植物 ROS 应激的 DNA 损伤修复。我们鉴定了 VdDpb4,它在 V. dahliae 中编码一个组蛋白折叠蛋白的 ISW2 染色质重塑复合物,是一个毒力基因。野生型拟南芥植物中 VdDpb4 缺失导致的毒力降低,在不产生 ROS 的 rbohd 突变体植物中受损。进一步对 VdDpb4 及其互作蛋白 VdIsw2(一种 ATP 依赖性染色质重塑因子)的特征进行了表征,我们发现虽然 VdIsw2 的耗竭导致染色质解凝聚,但 VdDpb4 的耗竭导致更紧凑的染色质结构,并影响 VdIsw2 对基因表达的转录效应,包括涉及 DNA 损伤修复的基因。VdDpb4 或 VdIsw2 的敲除突变体在存在 DNA 损伤剂的情况下降低了 DNA 修复效率,并且在植物感染期间降低了毒力。总之,我们的数据表明,VdDpb4 和 VdIsw2 在维持染色质结构以定位核小体和转录调控方面发挥作用,包括与 ROS 应激下的 DNA 修复以及发育和植物感染期间的基因有关。

https://cdn.ncbi.nlm.nih.gov/pmc/blobs/c0bb/7188298/4b420e2a7406/ppat.1008481.g001.jpg

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