Song Jiaojiao, Zhou Junmei
Children's Hospital of Shanghai, Shanghai, China.
Children's Hospital Affiliated to Shanghai Jiao Tong University, Shanghai, China.
PeerJ. 2020 Apr 10;8:e8940. doi: 10.7717/peerj.8940. eCollection 2020.
A prolonged preservation duration of blood specimens at 4 °C may occur due to the distance from collection points to storage facilities in many biobanks, especially for multicenter studies. This could lead to RNA degradation, affecting downstream analyses. However, effects of preservation durations at 4 °C on RNA quality in blood specimens need to be studied. We collected rabbit blood using EDTA tubes and stored them at 4 °C for different preservation durations. Then, we examined the quality of RNA from whole blood and leukocytes isolated from rabbit blood. Our results show that the purity of whole blood RNA and leukocyte RNA does not indicate significant change after rabbit blood is stored at 4 °C for different preservation durations (from 1 h to 7 days). The integrity of leukocyte RNA indicates the same result as above, but the integrity of whole blood RNA is significantly decreased after rabbit blood is stored at 4 °C for over 3 days. Moreover, expression of , , , and of whole blood RNA and leukocyte RNA remains basically stable, but expression of whole blood RNA or leukocyte RNA is significantly decreased after rabbit blood is stored at 4 °C for over 24 h or 7 days. Therefore, these results suggest that high-quality RNA is obtained from the fresher blood specimens and if blood specimens are stored for over 3 days at 4 °C, the quality of leukocyte RNA is more stable and of better quality than that of whole blood RNA.
在许多生物样本库中,由于采集点与存储设施之间的距离,血液样本在4°C下的保存时间可能会延长,尤其是在多中心研究中。这可能导致RNA降解,影响下游分析。然而,4°C下保存时间对血液样本中RNA质量的影响尚需研究。我们使用EDTA管采集兔血,并将其在4°C下保存不同时间。然后,我们检测了兔血全血及分离的白细胞中RNA的质量。我们的结果表明,兔血在4°C下保存不同时间(从1小时到7天)后,全血RNA和白细胞RNA的纯度没有明显变化。白细胞RNA的完整性呈现上述相同结果,但兔血在4°C下保存超过3天后,全血RNA的完整性显著下降。此外,全血RNA和白细胞RNA的、、、和的表达基本保持稳定,但兔血在4°C下保存超过24小时或7天后,全血RNA或白细胞RNA的表达显著下降。因此,这些结果表明,较新鲜的血液样本可获得高质量的RNA,并且如果血液样本在4°C下保存超过3天,白细胞RNA的质量比全血RNA更稳定且质量更好。