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环介导等温扩增结合比色和横向流动条带可视化在白喉棒状杆菌即时检测中的应用。

Application of loop-mediated isothermal amplification combined with colorimetric and lateral flow dipstick visualization as the potential point-of-care testing for Corynebacterium diphtheriae.

机构信息

Department of Sera and Vaccines Evaluation, National Institute of Public Health - National Institute of Hygiene, Chocimska 24, 00-791, Warsaw, Poland.

出版信息

BMC Infect Dis. 2020 Apr 25;20(1):308. doi: 10.1186/s12879-020-05037-z.

Abstract

BACKGROUND

Diphtheria outbreaks occurred in endemic areas and imported and indigenous cases are reported in UE/EEA. Because of the high infectiveness and severity of the disease, early and accurate diagnosis of each suspected case is essential for the treatment and management of the case and close contacts. The aim of the study was to establish simple and rapid testing methods based on Loop-Mediated Isothermal Amplification (LAMP) assay for the detection of Corynebacterium diphtheriae and differentiation between toxigenic and non-toxigenic strains.

METHODS

Corynebacterium diphtheriae and Corynebacterium ulcerans isolates from the National Institute of Public Health-National Institute of Hygiene collection were used for the development of LAMP assay for the diagnosis of diphtheria and nontoxigenic C. diphtheriae infections. Various colorimetric methods for visualization of results were investigated. Sensitivity and specificity of the assay were examined using a collection of DNA samples from various gram-positive and gram-negative bacteria.

RESULTS

The LAMP assay for tox and dtxR genes was developed. The sensitivity and specificity of the assay were calculated as 100%. The detection limit was estimated as 1.42 pg/μl concentration of DNA template when the reaction was conducted for 60 min. However, the detection limit was lowered 10 times for every 10 min of reduction in the time of incubation during the reaction. Positive results were successfully detected colorimetrically using hydroxynaphthol blue, calcein, QuantiFluor, and lateral flow Milenia HybriDetect dipsticks.

CONCLUSION

The assay developed in the study might be applied for point-of-care testing of diphtheria and other C. diphtheriae infections as well as for other infections caused by diphtheria-toxin producing Corynebacterium species. It is highly sensitive, specific, inexpensive, easy to use, and suitable for low-resource settings.

摘要

背景

白喉在流行地区爆发,且在欧盟/欧洲经济区有输入性和本土病例报告。由于该病传染性强,病情严重,因此对每个疑似病例进行早期、准确的诊断对于治疗和管理病例及其密切接触者至关重要。本研究旨在建立基于环介导等温扩增(LAMP)检测的简单、快速检测方法,用于检测白喉棒状杆菌和区分产毒株和非产毒株。

方法

使用国家公共卫生与环境卫生研究所的白喉棒状杆菌和溃疡棒状杆菌分离株,开发用于白喉诊断和非产毒白喉棒状杆菌感染的 LAMP 检测方法。研究了各种用于可视化结果的比色方法。使用来自各种革兰氏阳性和革兰氏阴性细菌的 DNA 样本集检查了该检测方法的灵敏度和特异性。

结果

开发了 tox 和 dtxR 基因的 LAMP 检测方法。该检测方法的灵敏度和特异性均为 100%。当反应进行 60 分钟时,检测限估计为 1.42 pg/μl 浓度的 DNA 模板。然而,在反应过程中,每次减少孵育时间 10 分钟,检测限就会降低 10 倍。使用羟基萘酚蓝、钙黄绿素、QuantiFluor 和侧向流动的 Milenia HybriDetect 侧流条成功地通过比色法检测到阳性结果。

结论

本研究中开发的检测方法可应用于白喉和其他白喉棒状杆菌感染的即时检测,以及其他由产白喉毒素的棒状杆菌引起的感染。它具有高度的灵敏度、特异性、价格低廉、易于使用,且适合于资源匮乏的环境。

https://cdn.ncbi.nlm.nih.gov/pmc/blobs/004e/7183728/145b536724f9/12879_2020_5037_Fig1_HTML.jpg

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