Institute of Biochemistry and Molecular Biology, Faculty of Medicine, University of Freiburg, Freiburg, Germany.
J Biosci. 2020;45.
The 165,137 bp plasmid pAO1 of carries the genes of a nicotine catabolic pathway. The genes are organized into several gene modules responsible for the catabolism of L- and D-nicotine to nicotine blue, alpha-ketoglutarate and succinate. Various modules of these genes have been shown to be present in gram-positive (Gram?) soil bacteria. The presence of the identical pAO1 nic-genes on the 288,370 bp plasmid pZXY21 of Arthrobacter sp. ZXY2 (96 percent to 100 percent at the nucleotide level) permitted the identification of the limits of this DNA fragment. At the 5' end of the nic-genes are located the ORFs of two predicted integrases of the tyrosine recombinase family with conserved R, H, R and Y catalytic residues and that of a small transposase with a predicted leucine zipper motive. They are related to Tn554A, Tn554B and Tn554C of and suggest that the entire nic-genes DNA fragment represents a large catabolic transposon. Surprisingly the nic-genes on pZXY21 were found to be interspersed by mobile elements encoding transposases of various IS families. Insertion of these IS elements disrupts nicotine degradation and divide the nic-genes DNA into potentially new transposons. This finding may illustrate how nicotine catabolic genes can be mobilized and spread by horizontal gene transfer to other soil bacteria.
pAO1 质粒是一种长 165137bp 的质粒,其携带尼古丁代谢途径的基因。这些基因组织成几个基因模块,负责将 L-和 D-尼古丁代谢为尼古丁蓝、α-酮戊二酸和琥珀酸。已经证明,这些基因的各种模块存在于革兰氏阳性(Gram?)土壤细菌中。Arthrobacter sp. ZXY2 的 288370bp 质粒 pZXY2 上存在相同的 pAO1 nic 基因(核苷酸水平上为 96% 到 100%),这使得能够确定该 DNA 片段的界限。nic 基因的 5'端是两个预测的酪氨酸重组酶家族内整合酶的 ORF,具有保守的 R、H、R 和 Y 催化残基,以及一个具有预测亮氨酸拉链基序的小转座酶。它们与 中的 Tn554A、Tn554B 和 Tn554C 相关,表明整个 nic 基因 DNA 片段代表一个大型代谢转座子。令人惊讶的是,pZXY21 上的 nic 基因被编码各种 IS 家族转座酶的可移动元件所穿插。这些 IS 元件的插入破坏了尼古丁的降解,并将 nic 基因 DNA 分成潜在的新转座子。这一发现可能说明了尼古丁代谢基因如何通过水平基因转移被动员和传播到其他土壤细菌中。