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在巴基斯坦分离出的口蹄疫病毒O/ME-SA/Ind-2001e毒株的基因组序列

Genome Sequences of Foot-and-Mouth Disease Virus O/ME-SA/Ind-2001e Strains Isolated in Pakistan.

作者信息

Hicks Hayley M, Wadsworth Jemma, Azhar Mehreen, Afzal Muhammad, Manzoor Shumaila, Abubakar Muhammad, Khan Ehtisham-Ul-Haq, King Donald P, Knowles Nick J

机构信息

The Pirbright Institute, Surrey, United Kingdom.

Food and Agriculture Organization of the United Nations, Pakistan Office, Islamabad, Pakistan.

出版信息

Microbiol Resour Announc. 2020 Apr 30;9(18):e00165-20. doi: 10.1128/MRA.00165-20.

DOI:10.1128/MRA.00165-20
PMID:32354972
原文链接:https://pmc.ncbi.nlm.nih.gov/articles/PMC7193927/
Abstract

The genome sequences of two foot-and-mouth disease type O viruses isolated from outbreaks of disease in cattle in Pakistan in 2019 are described. They were identified as belonging to serotype O, Middle East-South Asia topotype, Ind-2001 lineage, and e sublineage and represent the first identification of this lineage in Pakistan.

摘要

本文描述了2019年从巴基斯坦牛群疾病暴发中分离出的两株O型口蹄疫病毒的基因组序列。它们被鉴定为属于O血清型、中东-南亚拓扑型、Ind-2001谱系和e亚谱系,代表了该谱系在巴基斯坦的首次鉴定。

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本文引用的文献

1
Reconstructing the evolutionary history of pandemic foot-and-mouth disease viruses: the impact of recombination within the emerging O/ME-SA/Ind-2001 lineage.重建大流行口蹄疫病毒的进化史:新兴 O/ME-SA/Ind-2001 谱系内重组的影响。
Sci Rep. 2018 Oct 2;8(1):14693. doi: 10.1038/s41598-018-32693-8.
2
Emergence of an exotic strain of serotype O foot-and-mouth disease virus O/ME-SA/Ind-2001d in South-East Asia in 2015.2015 年东南亚出现了一种外来血清型 O 口蹄疫病毒 O/ME-SA/Ind-2001d。
Transbound Emerg Dis. 2018 Feb;65(1):e104-e112. doi: 10.1111/tbed.12687. Epub 2017 Aug 30.
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Genome Sequence of Foot-and-Mouth Disease Virus Serotype O Isolated from Morocco in 2015.2015年从摩洛哥分离出的口蹄疫病毒O型基因组序列
Genome Announc. 2016 Apr 21;4(2):e01746-15. doi: 10.1128/genomeA.01746-15.
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MEGA7: Molecular Evolutionary Genetics Analysis Version 7.0 for Bigger Datasets.MEGA7:适用于更大数据集的分子进化遗传学分析版本7.0
Mol Biol Evol. 2016 Jul;33(7):1870-4. doi: 10.1093/molbev/msw054. Epub 2016 Mar 22.
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Evolutionary dynamics of foot-and-mouth disease virus O/ME-SA/Ind2001 lineage.口蹄疫病毒O/ME-SA/Ind2001谱系的进化动力学
Vet Microbiol. 2015 Aug 5;178(3-4):181-9. doi: 10.1016/j.vetmic.2015.05.015. Epub 2015 May 27.
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Outbreaks of Foot-and-Mouth Disease in Libya and Saudi Arabia During 2013 Due to an Exotic O/ME-SA/Ind-2001 Lineage Virus.2013年利比亚和沙特阿拉伯因外来O/ME-SA/Ind-2001谱系病毒引发口蹄疫疫情。
Transbound Emerg Dis. 2016 Oct;63(5):e431-5. doi: 10.1111/tbed.12299. Epub 2014 Dec 7.
7
A universal protocol to generate consensus level genome sequences for foot-and-mouth disease virus and other positive-sense polyadenylated RNA viruses using the Illumina MiSeq.一种使用Illumina MiSeq为口蹄疫病毒和其他正链多聚腺苷酸化RNA病毒生成共识水平基因组序列的通用方案。
BMC Genomics. 2014 Sep 30;15(1):828. doi: 10.1186/1471-2164-15-828.
8
Growth of foot-and mouth disease virus in monolayer cultures of calf thyroid cells.口蹄疫病毒在小牛甲状腺细胞单层培养物中的生长情况。
Nature. 1966 Jun 4;210(5040):1079-80. doi: 10.1038/2101079a0.
9
Routine application of enzyme-linked immunosorbent assay in comparison with complement fixation for the diagnosis of foot-and-mouth and swine vesicular diseases.酶联免疫吸附测定法与补体结合试验在口蹄疫和猪水疱病诊断中的常规应用比较
Vet Microbiol. 1988 Mar;16(3):201-9. doi: 10.1016/0378-1135(88)90024-7.