Laboratory of RNA Biology, Institute of Molecular Genetics of the Czech Academy of Sciences, Videnska 1083, 14220 Prague, Czech Republic.
Faculty of Science, Charles University, 128 00 Prague, Czech Republic.
Nucleic Acids Res. 2020 Jun 19;48(11):6184-6197. doi: 10.1093/nar/gkaa301.
Spliceosomal small nuclear ribonucleoprotein particles (snRNPs) undergo a complex maturation pathway containing multiple steps in the nucleus and in the cytoplasm. snRNP biogenesis is strictly proofread and several quality control checkpoints are placed along the pathway. Here, we analyzed the fate of small nuclear RNAs (snRNAs) that are unable to acquire a ring of Sm proteins. We showed that snRNAs lacking the Sm ring are unstable and accumulate in P-bodies in an LSm1-dependent manner. We further provide evidence that defective snRNAs without the Sm binding site are uridylated at the 3' end and associate with DIS3L2 3'→5' exoribonuclease and LSm proteins. Finally, inhibition of 5'→3' exoribonuclease XRN1 increases association of ΔSm snRNAs with DIS3L2, which indicates competition and compensation between these two degradation enzymes. Together, we provide evidence that defective snRNAs without the Sm ring are uridylated and degraded by alternative pathways involving either DIS3L2 or LSm proteins and XRN1.
剪接体小核核糖核蛋白颗粒(snRNPs)经历一个复杂的成熟途径,包括核内和细胞质中的多个步骤。snRNP 的生物发生受到严格的校对,并且在途径上放置了几个质量控制检查点。在这里,我们分析了无法获得 Sm 蛋白环的小核 RNA(snRNA)的命运。我们表明,缺乏 Sm 环的 snRNA 不稳定,并以依赖于 LSm1 的方式在 P 体中积累。我们进一步提供证据表明,没有 Sm 结合位点的有缺陷的 snRNA 在 3' 末端被尿苷酸化,并与 DIS3L2 3'→5' 外切核酸酶和 LSm 蛋白结合。最后,抑制 5'→3' 外切核酸酶 XRN1 增加了 ΔSm snRNA 与 DIS3L2 的结合,这表明这两种降解酶之间存在竞争和补偿。总之,我们提供的证据表明,没有 Sm 环的有缺陷的 snRNA 被尿苷酸化,并通过涉及 DIS3L2 或 LSm 蛋白和 XRN1 的替代途径降解。