Goulet Adeline, Spinelli Silvia, Mahony Jennifer, Cambillau Christian
Architecture et Fonction des Macromolécules Biologiques, Aix-Marseille Université, Campus de Luminy, 13288 Marseille, France.
Architecture et Fonction des Macromolécules Biologiques, Centre National de la Recherche Scientifique (CNRS), Campus de Luminy, 13288 Marseille, France.
Viruses. 2020 May 6;12(5):512. doi: 10.3390/v12050512.
Bacteriophages can play beneficial roles in phage therapy and destruction of food pathogens. Conversely, they play negative roles as they infect bacteria involved in fermentation, resulting in serious industrial losses. phages possess a long non-contractile tail and use a mechanism of infection whose first step is host recognition and binding. They have evolved adhesion devices at their tails' distal end, tuned to recognize specific proteinaceous or saccharidic receptors on the host's surface that span a large spectrum of shapes. In this review, we aimed to identify common patterns beyond this apparent diversity. To this end, we analyzed siphophage tail tips or baseplates, evaluating their known structures, where available, and uncovering patterns with bioinformatics tools when they were not. It was thereby identified that a triad formed by three proteins in complex, i.e., the tape measure protein (TMP), the distal tail protein (Dit), and the tail-associated lysozyme (Tal), is conserved in all phages. This common scaffold may harbor various functional extensions internally while it also serves as a platform for plug-in ancillary or receptor-binding proteins (RBPs). Finally, a group of siphophage baseplates involved in saccharidic receptor recognition exhibits an activation mechanism reminiscent of that observed in .
噬菌体在噬菌体疗法和破坏食物病原体方面可以发挥有益作用。相反,当它们感染参与发酵的细菌时,会发挥负面作用,导致严重的工业损失。噬菌体拥有一条长长的非收缩性尾巴,并采用一种感染机制,其第一步是宿主识别和结合。它们在尾巴末端进化出了粘附装置,能够识别宿主表面各种形状的特定蛋白质或糖类受体。在这篇综述中,我们旨在找出这种明显多样性背后的共同模式。为此,我们分析了长尾噬菌体的尾巴末端或基板,评估了它们已知的结构(如果有的话),并在没有已知结构时使用生物信息学工具揭示模式。由此确定,由三种蛋白质组成的复合体形成的三联体,即卷尺蛋白(TMP)、远端尾蛋白(Dit)和尾相关溶菌酶(Tal),在所有噬菌体中都是保守的。这个共同的支架内部可能包含各种功能扩展,同时它也作为一个插入辅助或受体结合蛋白(RBP)的平台。最后,一组参与糖类受体识别的长尾噬菌体基板表现出一种激活机制,让人联想到在……中观察到的机制。