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噬菌体 SPP1 远端尾部蛋白(gp19.1)的晶体结构:革兰氏阳性侵染噬菌体的基板中心体范例。

Crystal structure of bacteriophage SPP1 distal tail protein (gp19.1): a baseplate hub paradigm in gram-positive infecting phages.

机构信息

Architecture et Fonction des Macromolécules Biologiques, UMR 6098 CNRS and Universités d'Aix-Marseille I & II, Campus de Luminy, Case 932, 13288 Marseille Cedex 09, France.

出版信息

J Biol Chem. 2010 Nov 19;285(47):36666-73. doi: 10.1074/jbc.M110.157529. Epub 2010 Sep 15.

Abstract

Siphophage SPP1 infects the gram-positive bacterium Bacillus subtilis using its long non-contractile tail and tail-tip. Electron microscopy (EM) previously allowed a low resolution assignment of most orf products belonging to these regions. We report here the structure of the SPP1 distal tail protein (Dit, gp19.1). The combination of x-ray crystallography, EM, and light scattering established that Dit is a back-to-back dimer of hexamers. However, Dit fitting in the virion EM maps was only possible with a hexamer located between the tail-tube and the tail-tip. Structure comparison revealed high similarity between Dit and a central component of lactophage baseplates. Sequence similarity search expanded its relatedness to several phage proteins, suggesting that Dit is a docking platform for the tail adsorption apparatus in Siphoviridae infecting gram-positive bacteria and that its architecture is a paradigm for these hub proteins. Dit structural similarity extends also to non-contractile and contractile phage tail proteins (gpV(N) and XkdM) as well as to components of the bacterial type 6 secretion system, supporting an evolutionary connection between all these devices.

摘要

噬菌 SPP1 利用其长不可收缩的尾部和尾部末端感染革兰氏阳性细菌枯草芽孢杆菌。电子显微镜(EM)先前允许对属于这些区域的大多数 orf 产物进行低分辨率分配。我们在这里报告 SPP1 远端尾部蛋白(Dit,gp19.1)的结构。X 射线晶体学、EM 和光散射的组合确定 Dit 是六聚体背对背二聚体。然而,只有将六聚体定位在尾管和尾端之间,才能将 Dit 拟合到病毒体 EM 图谱中。结构比较显示 Dit 与乳噬菌体基板的中心组件具有高度相似性。序列相似性搜索将其与几种噬菌体蛋白的相关性扩展,表明 Dit 是革兰氏阳性细菌感染的 Siphoviridae 尾部吸附装置的对接平台,其结构是这些中心蛋白的范例。Dit 的结构相似性也扩展到非收缩和收缩噬菌体尾部蛋白(gpV(N)和 XkdM)以及细菌类型 6 分泌系统的组件,支持所有这些设备之间的进化联系。

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