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基于网络药理学的方法研究三叶鬼针草治疗阿尔茨海默病的药理机制。

Network pharmacology-based strategy to investigate pharmacological mechanisms of Tinospora sinensis for treatment of Alzheimer's disease.

机构信息

School of Pharmacy, Jiangxi University of Traditional Chinese Medicine, Nanchang, Jiangxi, 330004, PR China.

Jiang Xi Provincial People's Hospital Affiliated to Nanchang University, Nanchang, Jiangxi, 330006, PR China.

出版信息

J Ethnopharmacol. 2020 Sep 15;259:112940. doi: 10.1016/j.jep.2020.112940. Epub 2020 May 7.

DOI:10.1016/j.jep.2020.112940
PMID:32389853
Abstract

ETHNOPHARMACOLOGICAL RELEVANCE

Tinospora sinensis (Lour.) Merr. belongs to the family Menispermaceae. It is called LeZhe and is widely used as a kind of folk medicine especially in the Tibetan Plateau of China. T. sinensis has the functions of clearing away heat and detoxification, dispelling wind and dredging collaterals, calming and soothing the nerves. T. sinensis is an effective medicine for the prevention and treatment of aging diseases such as Alzheimer's disease (AD) in the Tibetan Plateau of China, whereas its material basis and underlying mechanisms are not clear. The aim of this study was to investigate the material basis and potential mechanisms of T. sinensis in the treatment of AD by using network pharmacology and molecular docking.

MATERIALS AND METHODS

In this study, targets were collected from DrugBank database, Therapeutic Target Database (TTD) and literatures reports for the treatment of AD. Compounds were searched by literatures and systematic separation from T. sinensis. The molecular docking experiment was carried out by using Autodock Vina software to screen the bioactive compounds in T. sinensis and target proteins for AD. Then, the "compound-target network" was constructed by Cytoscape software. The drug-like properties of the active compounds were analyzed by pKCSM performs, and the protein-protein interaction (PPI) network was constructed by Search Tool for the Retrieval of Interacting Genes/Proteins (STRING). The Kyoto Encyclopedia of Genes and Genomes (KEGG) target pathway enrichment analysis was carried out by Database for Annotation, Visualization and Integrated Discovery (DAVID). Furthermore, the protective effect of neurons of two active compounds were verified with the injury cell model of PC12 and primary hippocampus neurons induced by Aβ. Finally, the key proteins of related pathways were quantitatively analyzed with Western blot method.

RESULTS

In total, 105 compounds and 38 targets have been screened. The main active compounds contained berberine, which belongs to alkaloids, Aurantiamide acetate, N-P-coumaroyltyramine, which belongs to amides, Trans-syringin and 3-demethyl-phillyrin, which belongs to phenylpropanoids. The targets covered inflammation-related proteins, including Protein kinase B (AKT), Phosphoinositide 3-kinase (PI3K), Tyrosine-protein kinase JAK1 (JAK1), mammalian target of rapamycin (mTOR), tumor necrosis factor alpha (TNF-α), Neuronal NOS (NOS1), and cholinergic function-related proteins, including α4-Nicotinic acetylcholine receptor (α4 nAChR), Muscarinic acetylcholine receptor M1 (Muscarnic M1). Inflammation and cholinergic dysfunction were the center of the network and occupy a dominant position. And the results of enrichment analysis shown the pathways mainly contained phosphoinositide-3-kinase/Akt (PI3K/Akt) signal pathway, neurotrophic factors (NTFs) signal pathway, Hypoxia-inducible factor 1 (HIF-1) signal pathway, mechanistic Target of Rapamycin (mTOR) signal pathway, Tumor necrosis factor (TNF) signal pathway, insulin resistance (IR). The results of in vitro assays showed that the tested compounds could significantly improve the survival rate and inhibit the apoptosis of PC12 cells and primary hippocampal neurons injured by Aβ. Western blot results showed that T. sinensis had a significant effect on the expression of protein PI3K and Akt.

CONCLUSION

Our results revealed that T. sinensis could prevent and treat AD through a multi-compound-multi-target-multi-pathway regulatory network. Our work also expected to provide new ideas and theoretical bases for searching for the active compounds in T. sinensis and potential mechanism in the prevention and treatment of AD by the network pharmacology and molecular docking. The results of in vitro assay and in vivo assay supported the results of molecular docking.

摘要

民族药理学相关性

钩藤(Lour.)Merr. 属于防己科。它被称为 LeZhe,在中国青藏高原广泛用作一种民间药物。钩藤具有清热解毒、祛风通络、镇静安神的作用。钩藤是中国青藏高原防治阿尔茨海默病(AD)等衰老性疾病的有效药物,但其物质基础和潜在机制尚不清楚。本研究旨在利用网络药理学和分子对接技术研究钩藤治疗 AD 的物质基础和潜在机制。

材料和方法

本研究从 DrugBank 数据库、治疗靶点数据库(TTD)和文献报告中收集了用于治疗 AD 的靶点。通过文献和系统分离钩藤中的化合物进行搜索。利用 Autodock Vina 软件进行分子对接实验,筛选钩藤和 AD 靶蛋白中的生物活性化合物。然后,利用 Cytoscape 软件构建“化合物-靶标网络”。利用 pKCSM 对活性化合物进行药物样性质分析,利用 Search Tool for the Retrieval of Interacting Genes/Proteins(STRING)构建蛋白质-蛋白质相互作用(PPI)网络。利用 Database for Annotation, Visualization and Integrated Discovery(DAVID)进行京都基因与基因组百科全书(KEGG)靶标途径富集分析。此外,采用 Aβ 诱导的 PC12 细胞和原代海马神经元损伤细胞模型验证了两种活性化合物对神经元的保护作用。最后,采用 Western blot 法对相关通路的关键蛋白进行定量分析。

结果

共筛选出 105 种化合物和 38 个靶标。主要的活性化合物包括生物碱类的小檗碱、酰胺类的橙皮酰胺乙酸酯、N-对香豆酰基酪氨酸、苯丙素类的反式-丁香苷和 3-去甲基-粉防己碱。靶标覆盖炎症相关蛋白,包括蛋白激酶 B(AKT)、磷酸肌醇 3-激酶(PI3K)、酪氨酸蛋白激酶 JAK1(JAK1)、哺乳动物雷帕霉素靶蛋白(mTOR)、肿瘤坏死因子-α(TNF-α)、神经元型一氧化氮合酶(NOS1)和胆碱能功能相关蛋白,包括α4-烟碱型乙酰胆碱受体(α4 nAChR)、毒蕈碱型乙酰胆碱受体 M1(Muscarnic M1)。炎症和胆碱能功能障碍是网络的中心,占据主导地位。富集分析结果表明,通路主要包括磷酸肌醇 3-激酶/蛋白激酶 B(PI3K/Akt)信号通路、神经营养因子(NTFs)信号通路、低氧诱导因子 1(HIF-1)信号通路、雷帕霉素靶蛋白(mTOR)信号通路、肿瘤坏死因子(TNF)信号通路、胰岛素抵抗(IR)。体外实验结果表明,测试化合物可显著提高 PC12 细胞和 Aβ 诱导损伤的原代海马神经元的存活率并抑制其凋亡。Western blot 结果表明,钩藤对 PI3K 和 Akt 蛋白的表达有显著影响。

结论

我们的研究结果表明,钩藤通过多化合物-多靶标-多途径调控网络来预防和治疗 AD。我们的工作还期望为利用网络药理学和分子对接技术寻找钩藤中的活性化合物以及 AD 防治的潜在机制提供新的思路和理论基础。体外和体内实验结果支持分子对接结果。

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