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监测新出现病原体传播和流行病学变化的框架:来自尼帕病毒的经验教训

A Framework to Monitor Changes in Transmission and Epidemiology of Emerging Pathogens: Lessons From Nipah Virus.

作者信息

Nikolay Birgit, Salje Henrik, Khan A K M Dawlat, Sazzad Hossain M S, Satter Syed M, Rahman Mahmudur, Doan Stephanie, Knust Barbara, Flora Meerjady Sabrina, Luby Stephen P, Cauchemez Simon, Gurley Emily S

机构信息

Mathematical Modelling of Infectious Diseases Unit, Institut Pasteur, CNRS, Paris, France.

Infectious Diseases Division, icddr,b, Dhaka, Bangladesh.

出版信息

J Infect Dis. 2020 May 11;221(Suppl 4):S363-S369. doi: 10.1093/infdis/jiaa074.

DOI:10.1093/infdis/jiaa074
PMID:32392322
原文链接:https://pmc.ncbi.nlm.nih.gov/articles/PMC7213557/
Abstract

It is of uttermost importance that the global health community develops the surveillance capability to effectively monitor emerging zoonotic pathogens that constitute a major and evolving threat for human health. In this study, we propose a comprehensive framework to measure changes in (1) spillover risk, (2) interhuman transmission, and (3) morbidity/mortality associated with infections based on 6 epidemiological key indicators derived from routine surveillance. We demonstrate the indicators' value for the retrospective or real-time assessment of changes in transmission and epidemiological characteristics using data collected through a long-standing, systematic, hospital-based surveillance system for Nipah virus in Bangladesh. We show that although interhuman transmission and morbidity/mortality indicators were stable, the number and geographic extent of spillovers varied significantly over time. This combination of systematic surveillance and active tracking of transmission and epidemiological indicators should be applied to other high-risk emerging pathogens to prevent public health emergencies.

摘要

全球卫生界发展监测能力,以有效监测对人类健康构成重大且不断演变威胁的新发人畜共患病原体,这至关重要。在本研究中,我们提出了一个综合框架,用于基于从常规监测中得出的6个流行病学关键指标来衡量(1)溢出风险、(2)人际传播以及(3)与感染相关的发病率/死亡率的变化。我们利用通过孟加拉国一个长期、系统的基于医院的尼帕病毒监测系统收集的数据,展示了这些指标在回顾性或实时评估传播和流行病学特征变化方面的价值。我们表明,尽管人际传播和发病率/死亡率指标稳定,但溢出事件的数量和地理范围随时间有显著变化。这种系统监测与对传播和流行病学指标的主动跟踪相结合的方法,应应用于其他高风险的新发病原体,以预防突发公共卫生事件。

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本文引用的文献

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Outbreak Investigation of Nipah Virus Disease in Kerala, India, 2018.2018 年印度喀拉拉邦尼帕病毒病疫情爆发调查。
J Infect Dis. 2019 May 24;219(12):1867-1878. doi: 10.1093/infdis/jiy612.
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Characterization of the Spatial and Temporal Distribution of Nipah Virus Spillover Events in Bangladesh, 2007-2013.2007-2013 年孟加拉国尼帕病毒溢出事件的时空分布特征。
J Infect Dis. 2018 Apr 11;217(9):1390-1394. doi: 10.1093/infdis/jiy015.
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Pathways to zoonotic spillover.人畜共患病溢出的途径。
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Investigating Rare Risk Factors for Nipah Virus in Bangladesh: 2001-2012.孟加拉国2001 - 2012年尼帕病毒罕见风险因素调查
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What factors might have led to the emergence of Ebola in West Africa?哪些因素可能导致了埃博拉病毒在西非的出现?
PLoS Negl Trop Dis. 2015 Jun 4;9(6):e0003652. doi: 10.1371/journal.pntd.0003652. eCollection 2015.
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Integrated cluster- and case-based surveillance for detecting stage III zoonotic pathogens: an example of Nipah virus surveillance in Bangladesh.用于检测Ⅲ期人畜共患病原体的基于聚集性病例的综合监测:以孟加拉国的尼帕病毒监测为例。
Epidemiol Infect. 2015 Jul;143(9):1922-30. doi: 10.1017/S0950268814002635. Epub 2014 Oct 24.
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Inference of R(0) and transmission heterogeneity from the size distribution of stuttering chains.从口吃链的大小分布推断 R(0)和传播异质性。
PLoS Comput Biol. 2013;9(5):e1002993. doi: 10.1371/journal.pcbi.1002993. Epub 2013 May 2.
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Using routine surveillance data to estimate the epidemic potential of emerging zoonoses: application to the emergence of US swine origin influenza A H3N2v virus.利用常规监测数据估计新发人畜共患病的流行潜力:应用于美国猪源甲型 H3N2v 流感病毒的出现。
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Date palm sap linked to Nipah virus outbreak in Bangladesh, 2008.2008 年,孟加拉国的尼帕病毒爆发与枣椰树汁有关。
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