Department of Physical Education, Shanghai Jiao Tong University, Shanghai, China.
Institute of Immunology, Shanghai Jiao Tong University School of Medicine, Shanghai, China.
J Interferon Cytokine Res. 2020 May;40(5):236-244. doi: 10.1089/jir.2019.0169.
Sedentary behavior increases the risk of many chronic disorders, in addition, these chronic diseases are associated with elevated markers interleukin-6 (IL-6). Increasing evidence indicates that physical activity can prevent chronic inflammatory disease. However, the effect of exercise on sedentary individuals with disparate basal serum IL-6 level was not well elucidated. In this study, the gene expression profile of GES12384 was downloaded from the Gene Expression Omnibus (GEO) database. This data set contained 12 sedentary middle-aged men (6 high IL-6 and 6 low IL-6 level), and their blood samples were taken in the pre-exercise period and at the end of 24 weeks of exercise. The differentially expressed genes (DEGs) of 24 weeks group were identified, followed by functional enrichment analysis. Subsequently, protein-protein interaction (PPI) network and transcription factors (TFs)-DEGs network were constructed. A total of 193 DEGs were identified between high and low IL-6 level in the 24 weeks group. Functional enrichment analysis showed that DEGs were mainly involved in African trypanosomiasis pathway. PPI network revealed that the hub genes included C-C motif chemokine receptor 7 (), hemoglobin subunit delta (), and interferon gamma (). Subnetworks analysis indicated that these genes were relevant to immune response, and participated in African trypanosomiasis pathway. The TF targets network found that myocyte enhancer factor 2A (MEF2A) was a key regulatory factor. In conclusion, the inflammation-related genes (, , and ) in sedentary individuals could be affected by exercise, and the identified DEGs and TFs in this study promoted our understanding of exercise inhibited the development of chronic disease. [Figure: see text].
久坐行为会增加许多慢性疾病的风险,此外,这些慢性疾病与升高的白细胞介素-6(IL-6)标志物相关。越来越多的证据表明,身体活动可以预防慢性炎症性疾病。然而,运动对基础血清 IL-6 水平不同的久坐个体的影响尚未得到很好的阐明。在这项研究中,从基因表达综合数据库(GEO)下载了 GES12384 的基因表达谱。该数据集包含 12 名久坐的中年男性(6 名高 IL-6 水平和 6 名低 IL-6 水平),在运动前和 24 周运动结束时采集了他们的血液样本。鉴定了 24 周组的差异表达基因(DEGs),随后进行了功能富集分析。随后,构建了蛋白质-蛋白质相互作用(PPI)网络和转录因子(TFs)-DEGs 网络。在 24 周组中,高和低 IL-6 水平之间共鉴定出 193 个 DEGs。功能富集分析表明,DEGs 主要参与非洲锥虫病途径。PPI 网络显示,枢纽基因包括 C-C 基序趋化因子受体 7()、血红蛋白亚基 δ()和干扰素 γ()。子网络分析表明,这些基因与免疫反应相关,并参与非洲锥虫病途径。TF 靶标网络发现肌细胞增强因子 2A(MEF2A)是一个关键的调节因子。总之,运动可以影响久坐个体的炎症相关基因(、和),本研究中鉴定的 DEGs 和 TFs 促进了我们对运动抑制慢性疾病发展的理解。[图:见正文]。