Khan Rao Muhammad Abid, Anwar Sana, Pirzada Zaid Ahmed
Department of Microbiology, University of Karachi, Karachi-75270, Pakistan.
Liaquat National Hospital, Karachi-75270, Pakistan.
Iran J Basic Med Sci. 2020 Jan;23(1):133-139. doi: 10.22038/IJBMS.2019.38635.9164.
, a notorious human pathogen is responsible to cause a wide range of infections varies from superficial common clinical illness to severe and life threatening infections. To our knowledge this is the first report exploring the types and superantigen/exotoxin gene profile of from Pakistan.
A total of 89 strains were collected predominantly from throat swabs followed by pus, tissues and wound swabs. Profile of five superantigen genes speA, speB, speC, speF and ssa was screened for all the types.
Extensive heterogeneity among strains was indicated, revealing 34 different types/ subtypes. The most prevalent types were and . Some of the types were exclusively isolated from invasive infections while others were isolated only from non-invasive infections indicating the possible link between types and invasive/ noninvasive infections. Similarly, erythromycin-resistant strains mainly belonged to three particular types. Multiplex PCR analysis indicated the presence of speB 100%, speF 76%, speC 20%, speA 18% and ssa 15%. Interestingly, superantigen genes speC and speA were mainly associated with invasive infections. Among the five superantigens tested, one strain of harbored all the analyzed exotoxin genes, while 4 strains carried 4 superantigen genes.
clones associated with invasive and non-invasive infections in Pakistan present differences in types, superantigens and antimicrobial resistance. The present data indicates the possible link between particular genetic lineage of a bacterium with the manifestation of the infection.
[病原体名称]是一种臭名昭著的人类病原体,可引发从浅表常见临床疾病到严重及危及生命的感染等广泛的感染。据我们所知,这是巴基斯坦首次探索[病原体名称]的类型及超抗原/外毒素基因谱的报告。
共收集了89株[病原体名称]菌株,主要来自咽拭子,其次是脓液、组织和伤口拭子。对所有[病原体名称]类型的五个超抗原基因speA、speB、speC、speF和ssa进行了基因谱筛查。
[病原体名称]菌株间存在广泛的异质性,共发现34种不同的[病原体名称]类型/亚型。最常见的[病原体名称]类型是[具体类型1]和[具体类型2]。一些[病原体名称]类型仅从侵袭性感染中分离得到,而其他类型仅从非侵袭性感染中分离得到,这表明[病原体名称]类型与侵袭性/非侵袭性感染之间可能存在联系。同样,耐红霉素菌株主要属于三种特定的[病原体名称]类型。多重PCR分析表明,speB的存在率为100%,speF为76%,speC为20%,speA为18%,ssa为15%。有趣的是,超抗原基因speC和speA主要与侵袭性感染相关。在检测的五种超抗原中,一株[病原体名称]携带了所有分析过的外毒素基因,而4株携带了4种超抗原基因。
在巴基斯坦,与侵袭性和非侵袭性感染相关的[病原体名称]克隆在类型、超抗原和抗菌耐药性方面存在差异。目前的数据表明,细菌的特定基因谱系与感染表现之间可能存在联系。